CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10016031m.g
(
Citrus clementina
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Ciclev10016031m.g
T264692_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10016031m
mTERF
38
188
LSTKPKSLLQNHPLYPPTQANLSFQIKEKILCLEIMGVDSGKALSLNPSLHSASLNSIEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLESVFNFLSHDLKVPEHDFRKVINKCPRLLTSRARDQLKPALFYLQRLGFKDLNALAY
Ciclev10016031m
mTERF
183
299
LNALAYQDSVLLVSNVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSVENNFKPKFEYFNLEMRGKLEELKEFPQYFAFSLEKRIKPRHMQALQSGARLSLPAMLKTSDEEFN
Links
Other
mTERF
family TFs
Other
Citrus clementina
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g035716m.g
Citrus sinensis
orange1.1g035716m.g
N
0.962
29599.m000171
Ricinus communis
29599.m000171
N
0.800
Pm010460
Prunus mume
Pm010460
N
0.767
PRUPE_ppa008991mg
Prunus persica
PRUPE_ppa008991mg
N
0.760
SapurV1A.0242s0210
Salix purpurea
SapurV1A.0242s0210
N
0.753
Cla019852
Citrullus lanatus
Cla019852
N
0.747
POPTR_0011s02560
Populus trichocarpa
POPTR_0011s02560
N
0.745
Ca_22558
Cicer arietinum
Ca_22558
N
0.742
TCM_029419
Theobroma cacao
TCM_029419
N
0.725
MTR_2g049780
Medicago truncatula
MTR_2g049780
N
0.719
evm.TU.supercontig_139.30
Carica papaya
evm.TU.supercontig_139.30
N
0.715
Gorai.011G047900
Gossypium raimondii
Gorai.011G047900
N
0.714
VIT_10s0003g04040
Vitis vinifera
VIT_10s0003g04040
N
0.713