CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.14571s0002
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.14571s0002
T264622_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.14571s0002.1.p
mTERF
79
330
LFSLFRDIGFSEEETEMILAKNPDIKLAPLDTIGARVASLQSLKINGFALQGLIAKCPNLLTSEEFDVVNSFLVDELEGRLEPELLERLLAVADTSILLSFNQKVRLLILHGIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFGGIGIIARRPVILNSDLDSQLIPRVNFIRDLSGEDDFATGTVLRRLPAILSYSVEHMNSHVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKE
Cagra.14571s0002.1.p
mTERF
317
487
KERKLRPRIEFLKECGFDSAGMFKFLSKAPLYLALSEDNLSHKLGFLVKIGYRHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSLEDILAMSTKHPQVLQYNYSSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFS
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgeneshPB_pg.37__87
Phycomyces blakesleeanus
fgeneshPB_pg.37__87
N
PaG_05155
Pseudozyma aphidis
PaG_05155
N
PFL1_04963
Pseudozyma flocculosa
PFL1_04963
N
PHSY_006649
Pseudozyma hubeiensis
PHSY_006649
N
PSEUBRA_SCAF1g00570
Pseudozyma brasiliensis
PSEUBRA_SCAF1g00570
N
RHTO_01675
Rhodosporidium toruloides
RHTO_01675
N
RTG_03055
Rhodotorula glutinis
RTG_03055
N
SPPG_03947
Spizellomyces punctatus
SPPG_03947
N
sr12192
Sporisorium reilianum
sr12192
N
UM00895
Ustilago maydis
UM00895
N