CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.14571s0002
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.14571s0002
T264622_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.14571s0002.1.p
mTERF
79
330
LFSLFRDIGFSEEETEMILAKNPDIKLAPLDTIGARVASLQSLKINGFALQGLIAKCPNLLTSEEFDVVNSFLVDELEGRLEPELLERLLAVADTSILLSFNQKVRLLILHGIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFGGIGIIARRPVILNSDLDSQLIPRVNFIRDLSGEDDFATGTVLRRLPAILSYSVEHMNSHVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKE
Cagra.14571s0002.1.p
mTERF
317
487
KERKLRPRIEFLKECGFDSAGMFKFLSKAPLYLALSEDNLSHKLGFLVKIGYRHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSLEDILAMSTKHPQVLQYNYSSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFS
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10026279m.g
Capsella rubella
Carubv10026279m.g
N
0.978
Bostr.26833s0853
Boechera stricta
Bostr.26833s0853
N
0.942
PTAC15
Arabidopsis lyrata
fgenesh2_kg.8__1315__AT5G54180.1
N
0.923
MTERF8
Arabidopsis thaliana
AT5G54180
N
0.890
Bra003005
Brassica rapa
Bra003005
N
0.887