CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra003005
(
Brassica rapa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bra003005
T262171_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra003005.1-P
mTERF
81
333
FSLFRDIGFKEEETEMILAKNPDVKSTPLDKISARVASLQSLKLDGFALQGLIAKCPSLLTSEELDLVITFLVDELEGRLDPELVERILAASDTSFLLSFNQKVRLLIHHGIPKEKISYVLSKVYLNKLMYQKSVEDIERLISYLEPFGGIGIIARRPVILNSDLDTQLIPRVEFIRNLSGEDDFATGTVLRRLPAILSYSVDHMTSHVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKESG
Bra003005.1-P
mTERF
318
488
KERKLRPRIEFLKESGFDSPGMFKFLSKAPLFLALSEDNLSHKLGFLVKIGYKHRTRELAFAMGAVTRTSSDNMQRVIGLYLSYGLSLEDILAMSTKHPQVLQYSHTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFS
Links
Other
mTERF
family TFs
Other
Brassica rapa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.26833s0853
Boechera stricta
Bostr.26833s0853
N
0.905
Cagra.14571s0002
Capsella grandiflora
Cagra.14571s0002
N
0.887
PTAC15
Arabidopsis lyrata
fgenesh2_kg.8__1315__AT5G54180.1
N
0.885
Bo9g115130
Brassica oleracea
Bo9g115130
N
0.773
Thhalv10013278m.g
Eutrema salsugineum
Thhalv10013278m.g
N
0.713