CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g115130
(
Brassica oleracea
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bo9g115130
T262164_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g115130.1
mTERF
53
170
LQRRETAHIHRCNCLTCTIDGETQIESLFSLFRDIGFKEEETEMILAKNPDVKSTPLDKISARVASLQSLKLDGFALQGLIAKCPSLLTSEELDLVITFLVDELEGRLDPELVERILA
Bo9g115130.1
mTERF
81
333
FSLFRDIGFKEEETEMILAKNPDVKSTPLDKISARVASLQSLKLDGFALQGLIAKCPSLLTSEELDLVITFLVDELEGRLDPELVERILAVSDTSFLLSFNQKVRLLIHHGIPKEKISYVLSKVYLNKLMYQKSVEDIERLISYLEPFGGIGIIARRPVILNSDLDTQLIPRVEFIRNLSGEDDFATGTVLRRLPAILSYSVDHMNSHVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKQSG
Bo9g115130.1
mTERF
317
488
SKERKLRPRIEFLKQSGFDSPGMFKFLSKAPLFLALSEDNLSHKLGFLVKIGYKHRTRELAFAMGAVTRTSSDNMQRVIGLYLSYGLSLEDILAMSTKHPQVLQYSHTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFS
Links
Other
mTERF
family TFs
Other
Brassica oleracea
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra003005
Brassica rapa
Bra003005
N
0.773
Thhalv10013278m.g
Eutrema salsugineum
Thhalv10013278m.g
N
0.732
Bostr.26833s0853
Boechera stricta
Bostr.26833s0853
N
0.708