CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.3262s0017
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.3262s0017
T264632_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.3262s0017.1.p
mTERF
149
257
PFFESLGLCPHEFEPFLPQKLMFLSDDGIMFENFHVLCNYGIPRGKIGRMYKEAREIFRYESGLLASKLRDYENLGLSKGTVIKLVTSCPLLLVGGIDAEFSSVVDKLK
Cagra.3262s0017.1.p
mTERF
285
516
IEFLDKVGCKDEKLSSLLKKYPALVIEGSGKKFYVLFGRLFKVGLQVDEIYSLFIDNPEMLSDKCVNNIQKTLDFLIAIKMETQFITKILLGHMELIGSCSLQAPRTACLSLNVRQDELCQILKKEPLRLFSFVSTTNKRKSKPLSEDSRKHSEKTAFLLRLGYLENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLG
Cagra.3262s0017.1.p
mTERF
428
570
PLSEDSRKHSEKTAFLLRLGYLENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMERIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFV
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_20016
Aegilops tauschii
F775_20016
N
MLOC_16882
Hordeum vulgare
MLOC_16882
N
OBART06G06930
Oryza barthii
OBART06G06930
N
OGLUM02G34390
Oryza glumaepatula
OGLUM02G34390
N
OLONG_009224
Oryza longistaminata
OLONG_009224
N
OPUNC02G31340
Oryza punctata
OPUNC02G31340
N
ORGLA11G0178000
Oryza glaberrima
ORGLA11G0178000
N
ORGLA11G0181000
Oryza glaberrima
ORGLA11G0181000
N
Traes_6DL_021E9A3A9
Triticum aestivum
Traes_6DL_021E9A3A9
N
TRIUR3_11819
Triticum urartu
TRIUR3_11819
N