Pavir.Bb03222 (Panicum virgatum)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Pavir.Bb03222 T265042_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb03222.1.p mTERF 169 273
Pavir.Bb03222.1.p mTERF 262 474

Links

Other mTERF family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00088p00159600 Amborella trichopoda AMTR_s00088p00159600 N 0.721
Aquca_005_00236 Aquilegia coerulea Aquca_005_00236 N 0.767
BGIOSGA026020 Oryza indica BGIOSGA026020 N 0.764
BRADI1G23400 Brachypodium distachyon BRADI1G23400 N 0.870
Ciclev10008511m.g Citrus clementina Ciclev10008511m.g N 0.729
Cucsa.304690 Cucumis sativus Cucsa.304690 N 0.713
F775_02643 Aegilops tauschii F775_02643 N 0.862
gene03554-v1.0-hybrid Fragaria vesca gene03554-v1.0-hybrid N 0.717
GRMZM2G130773 Zea mays GRMZM2G130773 N 0.935
GSMUA_Achr3G29890_001 Musa acuminata GSMUA_Achr3G29890_001 N 0.766
LPERR07G17420 Leersia perrieri LPERR07G17420 N 0.866
Lus10003775.g Linum usitatissimum Lus10003775.g N 0.714
MLOC_4927 Hordeum vulgare MLOC_4927 N 0.877
OB07G25840 Oryza brachyantha OB07G25840 N 0.824
OBART07G20100 Oryza barthii OBART07G20100 N 0.812
OGLUM07G19880 Oryza glumaepatula OGLUM07G19880 N 0.769
OMERI07G16780 Oryza meridionalis OMERI07G16780 N 0.762
OPUNC07G18990 Oryza punctata OPUNC07G18990 N 0.809
orange1.1g010604m.g Citrus sinensis orange1.1g010604m.g N 0.730
OS07G0583200 Oryza sativa OS07G0583200 N 0.767
Pavir.J07102 Panicum virgatum Pavir.J07102 N 0.978
PDK_20s1307431g001 Phoenix dactylifera PDK_20s1307431g001 N 0.762
Pm029551 Prunus mume Pm029551 N 0.701
PRUPE_ppa006059m1g Prunus persica PRUPE_ppa006059m1g N 0.704
Sb02g037620 Sorghum bicolor Sb02g037620 N 0.924
Si029526m.g Setaria italica Si029526m.g N 0.896
Traes_2AS_2C198FE96 Triticum aestivum Traes_2AS_2C198FE96 N 0.752
Traes_2BS_999491428 Triticum aestivum Traes_2BS_999491428 N 0.857
Traes_2DS_BCB7C3C11 Triticum aestivum Traes_2DS_BCB7C3C11 N 0.862
TRIUR3_21656 Triticum urartu TRIUR3_21656 N 0.756