Bo7g105430 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g105430 T267517_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.765 0.839
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.765 0.839
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.748 0.753
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.748 0.753
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.720 0.742
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.696 0.753
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.696 0.753
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.687 0.710
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.687 0.710
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.668 0.742
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.661 0.688
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.661 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g105430.1 Myb 15 62
Bo7g105430.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

361 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000844001 Angiostrongylus costaricensis ACOC_0000844001 I
ALUE_0000650501 Ascaris lumbricoides ALUE_0000650501 I
ANCCAN_07957 Ancylostoma caninum ANCCAN_07957 I
ANCCEY_15520 Ancylostoma ceylanicum ANCCEY_15520 I
ANCDUO_00071 Ancylostoma duodenale ANCDUO_00071 I
ASIM_0001003201 Anisakis simplex ASIM_0001003201 I
ASU_03710 Ascaris suum ASU_03710 I
Bm6776 Brugia malayi Bm6776 I
DICVIV_12815 Dictyocaulus viviparus DICVIV_12815 I
GPUH_0002134401 Gongylonema pulchrum GPUH_0002134401 I
Hba_19892 Heterorhabditis bacteriophora Hba_19892 I
HCOI00898900 Haemonchus contortus HCOI00898900 I
HPBE_0000764601 Heligmosomoides bakeri HPBE_0000764601 I
HPLM_0000552201 Haemonchus placei HPLM_0000552201 I
L596_g5816 Steinernema carpocapsae L596_g5816 I
L892_g3951 Steinernema scapterisci L892_g3951 I
L893_g18096 Steinernema glaseri L893_g18096 I
L898_g620 Steinernema monticolum L898_g620 I
LOAG_02863 Loa loa LOAG_02863 I
nAv.1.0.1.g00776 Acanthocheilonema viteae nAv.1.0.1.g00776 I
NBR_0000887901 Nippostrongylus brasiliensis NBR_0000887901 I
nDi.2.2.2.g05199 Dirofilaria immitis nDi.2.2.2.g05199 I
NECAME_09605 Necator americanus NECAME_09605 I
nLs.2.1.2.g05605 Litomosoides sigmodontis nLs.2.1.2.g05605 I
nOo.2.0.1.g03339 Onchocerca ochengi nOo.2.0.1.g03339 I
OESDEN_02547 Oesophagostomum dentatum OESDEN_02547 I
OESDEN_11135 Oesophagostomum dentatum OESDEN_11135 I
PTRK_0000025200 Parastrongyloides trichosuri PTRK_0000025200 N
RSKR_0001156700 Rhabditophanes kr3021 RSKR_0001156700 N
scaffold5-EXSNAP2012.16 Pristionchus exspectatus scaffold5-EXSNAP2012.16 I
SMU15029949 Schmidtea mediterranea SMU15029949 I
SSTP_0000922000 Strongyloides stercoralis SSTP_0000922000 N
SVE_0978200 Strongyloides venezuelensis SVE_0978200 N
TCNE_0001890401 Toxocara canis TCNE_0001890401 I
TELCIR_00805 Teladorsagia circumcincta TELCIR_00805 I
WBGene00242147 Onchocerca volvulus WBGene00242147 I
WUBG_05875 Wuchereria bancrofti WUBG_05875 I