Bo8g079430 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo8g079430 T267563_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.879 0.968
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.879 0.968
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.879 0.968
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.879 0.968
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.879 0.968
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.803 0.882
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.803 0.882
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.803 0.882
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.742 0.817
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.738 0.817
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.738 0.806
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.738 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g079430.1 Myb 6 52
Bo8g079430.1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00016p00207780 Amborella trichopoda AMTR_s00016p00207780 N
Aquca_011_00061 Aquilegia coerulea Aquca_011_00061 N
Aquca_021_00065 Aquilegia coerulea Aquca_021_00065 N
cassava38785.m1 Manihot esculenta cassava38785.m1 N
Ciclev10018153m.g Citrus clementina Ciclev10018153m.g N
Cla012038 Citrullus lanatus Cla012038 N
Cucsa.087900 Cucumis sativus Cucsa.087900 N
Eucgr.I01625 Eucalyptus grandis Eucgr.I01625 N
gene01356-v1.0-hybrid Fragaria vesca gene01356-v1.0-hybrid N
GLYMA19G26735 Glycine max GLYMA19G26735 N
GRMZM2G342217 Zea mays GRMZM2G342217 N
LPERR11G11520 Leersia perrieri LPERR11G11520 N
Lus10041540.g Linum usitatissimum Lus10041540.g N
MTR_7g027190 Medicago truncatula MTR_7g027190 N
ONIVA11G13990 Oryza nivara ONIVA11G13990 N
OPUNC11G12230 Oryza punctata OPUNC11G12230 N
orange1.1g045762m.g Citrus sinensis orange1.1g045762m.g N
PGSC0003DMG400020243 Solanum tuberosum PGSC0003DMG400020243 N
Pm016121 Prunus mume Pm016121 N
TCM_017269 Theobroma cacao TCM_017269 N