Bra012149 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra012149 T267840_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.909 0.989
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.909 0.989
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.909 0.989
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.833 0.892
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.833 0.892
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.833 0.892
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.833 0.892
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.833 0.892
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.798 0.860
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.798 0.839
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.798 0.839
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.785 0.849
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.684 0.774
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.679 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra012149.1-P Myb 6 52
Bra012149.1-P Myb 58 103

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

324 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB000417 Anopheles albimanus AALB000417 N
AALB008493 Anopheles albimanus AALB008493 N
AARA011013 Anopheles arabiensis AARA011013 N
AATE002453 Anopheles atroparvus AATE002453 N
ACEP16054 Atta cephalotes ACEP16054 N
ACEP16128 Atta cephalotes ACEP16128 N
ACEP18777 Atta cephalotes ACEP18777 N
ACHR009374 Anopheles christyi ACHR009374 N
ACUA008906 Anopheles culicifacies ACUA008906 N
ACUA018702 Anopheles culicifacies ACUA018702 N
ACUA028082 Anopheles culicifacies ACUA028082 N
ADAC010198 Anopheles darlingi ADAC010198 N
AEPI001845 Anopheles epiroticus AEPI001845 N
AEPI004511 Anopheles epiroticus AEPI004511 N
Afo_R005342 Aptenodytes forsteri Afo_R005342 N
AFUN001004 Anopheles funestus AFUN001004 N
AFUN010567 Anopheles funestus AFUN010567 N
AGAP011712 Anopheles gambiae AGAP011712 N
Alligator_sinensis_CCG010046.1 Alligator sinensis Alligator_sinensis_CCG010046.1 N
AMEM014364 Anopheles merus AMEM014364 N
AMIN000991 Anopheles minimus AMIN000991 N
ANCCAN_04327 Ancylostoma caninum ANCCAN_04327 N
ANCCEY_00583 Ancylostoma ceylanicum ANCCEY_00583 N
ANCDUO_24135 Ancylostoma duodenale ANCDUO_24135 N
ANCDUO_27140 Ancylostoma duodenale ANCDUO_27140 N
Aqu1.211340 Amphimedon queenslandica Aqu1.211340 N
AQUA000257 Anopheles quadriannulatus AQUA000257 N
AQUA010449 Anopheles quadriannulatus AQUA010449 N
ASTEI10438 Anopheles stephensi ASTEI10438 N
A_04261 Schistosoma haematobium A_04261 N
BGIBMGA003174 Bombyx mori BGIBMGA003174 N
BGIBMGA006719 Bombyx mori BGIBMGA006719 N
BGIBMGA012898 Bombyx mori BGIBMGA012898 N
BGLB011455 Biomphalaria glabrata BGLB011455 N
Bm3498 Brugia malayi Bm3498 I
Brh_R011566 Buceros rhinoceros Brh_R011566 N
Cflo_02417--XP_001121225.1_APIME Camponotus floridanus Cflo_02417--XP_001121225.1_APIME N
CGOC_0001264301 Cylicostephanus goldi CGOC_0001264301 N
CJA31660 Caenorhabditis japonica CJA31660 N
D915_02167 Fasciola hepatica D915_02167 N
D915_04736 Fasciola hepatica D915_04736 N
DICVIV_10715 Dictyocaulus viviparus DICVIV_10715 N
DME_0000818901 Dracunculus medinensis DME_0000818901 N
ECANG7_07880 Echinococcus canadensis ECANG7_07880 N
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N
EEL_0001013401 Elaeophora elaphi EEL_0001013401 N
ENSCJAG00000000826 Callithrix jacchus ENSCJAG00000000826 N
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I
ENSDORG00000012736 Dipodomys ordii ENSDORG00000012736 I
ENSETEG00000007920 Echinops telfairi ENSETEG00000007920 N
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I
ENSOANG00000029773 Ornithorhynchus anatinus ENSOANG00000029773 I
ENSPCAG00000011680 Procavia capensis ENSPCAG00000011680 N
ENSXMAG00000002873 Xiphophorus maculatus ENSXMAG00000002873 N
ENSXMAG00000005990 Xiphophorus maculatus ENSXMAG00000005990 N
EVEC_0000447801 Enterobius vermicularis EVEC_0000447801 N
GD16691 Drosophila simulans FBgn0188280 N
GF19461 Drosophila ananassae FBgn0096470 N
GG18707 Drosophila erecta FBgn0110916 N
GPUH_0002190501 Gongylonema pulchrum GPUH_0002190501 N
HCOI01136500 Haemonchus contortus HCOI01136500 N
HHAL010563-PA Halyomorpha halys HHAL010563-PA N
HMEL004264 Heliconius melpomene HMEL004264 N
HPBE_0001971401 Heligmosomoides bakeri HPBE_0001971401 N
Hsal_04126--XP_001122560.1_APIME Harpegnathos saltator Hsal_04126--XP_001122560.1_APIME I
Hsal_09269--XP_394607.3_APIME Harpegnathos saltator Hsal_09269--XP_394607.3_APIME N
ISCW019287 Ixodes scapularis ISCW019287 N
KGM_15500 Danaus plexippus KGM_15500 N
L798_01365 Zootermopsis nevadensis L798_01365 N
L798_14238 Zootermopsis nevadensis L798_14238 N
L892_g20532 Steinernema scapterisci L892_g20532 N
LCUP008640 Lucilia cuprina LCUP008640 N
LDEC010813 Leptinotarsa decemlineata LDEC010813 N
NBR_0000542501 Nippostrongylus brasiliensis NBR_0000542501 N
NBR_0001177301 Nippostrongylus brasiliensis NBR_0001177301 N
NBR_0002182001 Nippostrongylus brasiliensis NBR_0002182001 N
NECAME_19347 Necator americanus NECAME_19347 N
nOo.2.0.1.g12774 Onchocerca ochengi nOo.2.0.1.g12774 N
nOo.2.0.1.g12879 Onchocerca ochengi nOo.2.0.1.g12879 N
Ocbimv22013221m.g Octopus bimaculoides Ocbimv22013221m.g N
OESDEN_02780 Oesophagostomum dentatum OESDEN_02780 N
OESDEN_07954 Oesophagostomum dentatum OESDEN_07954 N
OFLC_0001184101 Onchocerca flexuosa OFLC_0001184101 N
PPA14512 Pristionchus pacificus PPA14512 N
PPAI002123 Phlebotomus papatasi PPAI002123 N
PPAI007567 Phlebotomus papatasi PPAI007567 N
PXEA_0000704401 Protopolystoma xenopodis PXEA_0000704401 N
PXEA_0001803801 Protopolystoma xenopodis PXEA_0001803801 N
SINV16738 Solenopsis invicta SINV16738 N
SINV17750 Solenopsis invicta SINV17750 I
SINV20004 Solenopsis invicta SINV20004 N
Smp_156650 Schistosoma mansoni Smp_156650 N
SMTD_0001100101 Schistosoma mattheei SMTD_0001100101 N
SMUV_0000075501 Syphacia muris SMUV_0000075501 N
SNAPOd2T00025688001 Oikopleura dioica SNAPOd2T00025688001 N
SPER_0002063901 Spirometra erinaceieuropaei SPER_0002063901 N
SPER_0003769001 Spirometra erinaceieuropaei SPER_0003769001 N
SPER_0003779701 Spirometra erinaceieuropaei SPER_0003779701 N
SVUK_0001851801 Strongylus vulgaris SVUK_0001851801 N
Tal_R004166 Tyto alba Tal_R004166 N
Tal_R010698 Tyto alba Tal_R010698 N
TBX15 Bos taurus ENSBTAG00000007767 I
TBX5 Vicugna pacos ENSVPAG00000009445 I
TELCIR_17829 Teladorsagia circumcincta TELCIR_17829 N
TRE_0001207201 Trichobilharzia regenti TRE_0001207201 N
YQE_06268 Dendroctonus ponderosae YQE_06268 N
YQE_10906 Dendroctonus ponderosae YQE_10906 N