GLYMA08G20270 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA08G20270 T271437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.788 0.787
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.770 0.787
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.770 0.787
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.752 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G20270.1 Myb 5 57
GLYMA08G20270.2 Myb 5 57

Links

Other Myb/SANT family TFs
Other Glycine max TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_036870 Albugo laibachii ALNC14_036870 N
e_gw1.3.305.1 Phytophthora capsici e_gw1.3.305.1 N
F443_05618 Phytophthora parasitica F443_05618 N
fgenesh_scip_prom.28083.9880 Phytophthora lateralis fgenesh_scip_prom.28083.9880 N
fgenesh_scip_prom.46568.10844 Phytophthora kernoviae fgenesh_scip_prom.46568.10844 N
maker-pag1_scaffold_104-snap-gene-0.37 Pythium aphanidermatum maker-pag1_scaffold_104-snap-gene-0.37 N
maker-par_contig_359-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_359-snap-gene-0.8 N
maker-pir_contig_315-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_315-fgenesh-gene-0.0 N
maker-piw_contig_348-snap-gene-0.7 Pythium iwayamai maker-piw_contig_348-snap-gene-0.7 N
maker-pve_contig_589-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_589-fgenesh-gene-0.0 N
Phyra74345 Phytophthora ramorum Phyra74345 N
Phyra84059 Phytophthora ramorum Phyra84059 N
Physo127312 Phytophthora sojae Physo127312 N
PITG_01135 Phytophthora infestans PITG_01135 N
SPRG_07347 Saprolegnia parasitica SPRG_07347 N