GLYMA10G38090 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA10G38090 T271515_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.714 0.763
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.710 0.710
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.710 0.710
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.696 0.753
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.696 0.753
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.695 0.753
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.686 0.742
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.686 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G38090.2 Myb 14 61
GLYMA10G38090.2 Myb 67 112
GLYMA10G38090.3 Myb 14 61
GLYMA10G38090.3 Myb 67 112

Links

Other Myb/SANT family TFs
Other Glycine max TFs

571 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30006.m000282 Ricinus communis 30006.m000282 N
30170.m013669 Ricinus communis 30170.m013669 N
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N
AT2G41710 Arabidopsis thaliana AT2G41710 N
BBM Vitis vinifera VIT_04s0023g00950 N
BGIOSGA023402 Oryza indica BGIOSGA023402 N
Bo3g035770 Brassica oleracea Bo3g035770 N
Bo4g013420 Brassica oleracea Bo4g013420 N
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N
Bra004641 Brassica rapa Bra004641 N
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N
Carubv10023272m.g Capsella rubella Carubv10023272m.g N
cassava19560.m1 Manihot esculenta cassava19560.m1 N
cassava40681.m1 Manihot esculenta cassava40681.m1 N
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N
Ca_07237 Cicer arietinum Ca_07237 N
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N
Cla022214 Citrullus lanatus Cla022214 N
Cucsa.338170 Cucumis sativus Cucsa.338170 N
Cucsa.353040 Cucumis sativus Cucsa.353040 I
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N
evm.TU.supercontig_129.70 Carica papaya evm.TU.supercontig_129.70 N
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N
F775_10869 Aegilops tauschii F775_10869 N
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N
GLYMA02G33090 Glycine max GLYMA02G33090 N
GLYMA03G29240 Glycine max GLYMA03G29240 N
GLYMA19G31960 Glycine max GLYMA19G31960 N
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N
GRMZM2G013657 Zea mays GRMZM2G013657 N
GRMZM2G146688 Zea mays GRMZM2G146688 N
LjSGA_012098.1 Lotus japonicus LjSGA_012098.1 N
LPERR05G11930 Leersia perrieri LPERR05G11930 N
Lus10000965.g Linum usitatissimum Lus10000965.g N
Lus10011730.g Linum usitatissimum Lus10011730.g N
Lus10039650.g Linum usitatissimum Lus10039650.g N
Lus10040140.g Linum usitatissimum Lus10040140.g N
MDP0000314518 Malus domestica MDP0000314518 N
MDP0000803527 Malus domestica MDP0000803527 N
mgf017600m Mimulus guttatus mgf017600m N
mgf019897m Mimulus guttatus mgf019897m N
MLOC_7325 Hordeum vulgare MLOC_7325 N
MTR_7g091390 Medicago truncatula MTR_7g091390 N
OB03G42600 Oryza brachyantha OB03G42600 N
OB05G22940 Oryza brachyantha OB05G22940 N
OB06G31060 Oryza brachyantha OB06G31060 N
OBART05G15060 Oryza barthii OBART05G15060 N
OBART06G23380 Oryza barthii OBART06G23380 N
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N
OGLUM06G03000 Oryza glumaepatula OGLUM06G03000 N
OLONG_002212 Oryza longistaminata OLONG_002212 N
OLONG_020459 Oryza longistaminata OLONG_020459 N
OMERI05G13370 Oryza meridionalis OMERI05G13370 N
OMERI06G23370 Oryza meridionalis OMERI06G23370 N
ONIVA05G15390 Oryza nivara ONIVA05G15390 N
OPUNC05G13110 Oryza punctata OPUNC05G13110 N
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N
PDK_20s1313371g002 Phoenix dactylifera PDK_20s1313371g002 N
PK12273.1 Cannabis sativa PK12273.1 N
PK15670.1 Cannabis sativa PK15670.1 N
PK18855.1 Cannabis sativa PK18855.1 N
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N
SapurV1A.0037s0030 Salix purpurea SapurV1A.0037s0030 N
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N
Sb09g019190 Sorghum bicolor Sb09g019190 N
Si021952m.g Setaria italica Si021952m.g N
Solyc02g030210.2 Solanum lycopersicum Solyc02g030210.2 N
TCM_024554 Theobroma cacao TCM_024554 N
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N
Traes_6AS_53FA034C9 Triticum aestivum Traes_6AS_53FA034C9 N
TRIUR3_07433 Triticum urartu TRIUR3_07433 N
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N