CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR04G19390 *(Leersia perrieri)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	LPERR04G19390	T273714_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB58 M07005_2.00	Arabidopsis thaliana	NNYYYACCWAMCHHH	DDDGKTWGGTRRRNN	Dap-seq OMalley et al.(2016) MYB58_col_a	0.704	0.777
MYB58 M07006_2.00	Arabidopsis thaliana	HNNYHYACCWAMCHHHNNNNH	DNNNNDDDGKTWGGTRDRNND	Dap-seq OMalley et al.(2016) MYB58_colamp_a	0.704	0.777
AtMYB10 M07081_2.00	Arabidopsis thaliana	YYYACCWAMCHHHHNH	DNDDDDGKTWGGTRRR	Dap-seq OMalley et al.(2016) MYB10_col_a	0.703	0.755
AtMYB10 M07082_2.00	Arabidopsis thaliana	NYYYACCWAMCHHH	DDDGKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB10_colamp_a	0.703	0.755
ATMYB13 M06999_2.00	Arabidopsis thaliana	HYCACCWACCHHHNH	DNDDDGGTWGGTGRD	Dap-seq OMalley et al.(2016) MYB13_col_a	0.676	0.745
ATMYB13 M07000_2.00	Arabidopsis thaliana	BYCACCWACCHHHNNHNN	NNDNNDDDGGTWGGTGRV	Dap-seq OMalley et al.(2016) MYB13_colamp_a	0.676	0.745
MYB107 M07061_2.00	Arabidopsis thaliana	NDDWDBBYYACCWAMYHH	DDRKTWGGTRRVVHWHHN	Dap-seq OMalley et al.(2016) MYB107_col_a	0.670	0.766
MYB107 M07062_2.00	Arabidopsis thaliana	WNBYYYACCWAMYH	DRKTWGGTRRRVNW	Dap-seq OMalley et al.(2016) MYB107_colamp_a	0.670	0.766
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR04G19390.1	Myb	16	63	RGSWTPEEDMRLVAYIQKYGHANWRALPKQAGLLRCGKSCRLRWINYL
LPERR04G19390.1	Myb	69	131	RGNFTAEEEETIIKLHALLGNKYVPTTGFNFQWIMDSARWSKIASCLPGRTDNEIKNVWNTHL

Links
Other Myb/SANT family TFs
Other *Leersia perrieri* TFs

214 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
A_06784	Schistosoma haematobium	A_06784	N
csin108446	Clonorchis sinensis	csin108446	N
D915_03988	Fasciola hepatica	D915_03988	N
PXEA_0001482701	Protopolystoma xenopodis	PXEA_0001482701	N
SCUD_0002117401	Schistosoma curassoni	SCUD_0002117401	N
Sjc_0048660	Schistosoma japonicum	Sjc_0048660	N
Smp_068240	Schistosoma mansoni	Smp_068240	N
SMTD_0001402601	Schistosoma mattheei	SMTD_0001402601	N
TRE_0001278101	Trichobilharzia regenti	TRE_0001278101	N