MLOC_14118 (Hordeum vulgare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MLOC_14118 T274444_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.891 0.978
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.881 0.913
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.881 0.913
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.845 0.870
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.845 0.870
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.795 0.870
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.795 0.870
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.795 0.870
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.790 0.783
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.790 0.783
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.790 0.783
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.790 0.783
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.790 0.783
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.775 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_14118.1 Myb 24 69
MLOC_14118.2 Myb 24 69
MLOC_14118.3 Myb 24 69

Links

Other Myb/SANT family TFs
Other Hordeum vulgare TFs

302 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0001010801 Angiostrongylus costaricensis ACOC_0001010801 I
ANCCAN_00201 Ancylostoma caninum ANCCAN_00201 I
ANCCEY_05459 Ancylostoma ceylanicum ANCCEY_05459 I
ANCDUO_04687 Ancylostoma duodenale ANCDUO_04687 I
ASU_03721 Ascaris suum ASU_03721 I
A_02157 Schistosoma haematobium A_02157 I
Bm2429 Brugia malayi Bm2429 I
BTMF_0000380401 Brugia timori BTMF_0000380401 I
BXY_0899900 Bursaphelenchus xylophilus BXY_0899900 I
CBG07600 Caenorhabditis briggsae CBG07600 I
CBN14580 Caenorhabditis brenneri CBN14580 I
CJA07724 Caenorhabditis japonica CJA07724 I
CRE15316 Caenorhabditis remanei CRE15316 I
csin104204 Clonorchis sinensis csin104204 I
DICVIV_09967 Dictyocaulus viviparus DICVIV_09967 I
DME_0000200401 Dracunculus medinensis DME_0000200401 I
ECANG7_02721 Echinococcus canadensis ECANG7_02721 I
EEL_0000568101 Elaeophora elaphi EEL_0000568101 I
EmuJ_001017500 Echinococcus multilocularis EmuJ_001017500 I
HCOI01030300 Haemonchus contortus HCOI01030300 I
HDID_0000928001 Hymenolepis diminuta HDID_0000928001 I
HPLM_0000563501 Haemonchus placei HPLM_0000563501 I
L596_g5772 Steinernema carpocapsae L596_g5772 I
L892_g3913 Steinernema scapterisci L892_g3913 I
L898_g4875 Steinernema monticolum L898_g4875 I
LOAG_00574 Loa loa LOAG_00574 I
MCOS_0000604201 Mesocestoides corti MCOS_0000604201 I
nAv.1.0.1.g06838 Acanthocheilonema viteae nAv.1.0.1.g06838 I
NBR_0001794801 Nippostrongylus brasiliensis NBR_0001794801 I
nDi.2.2.2.g01941 Dirofilaria immitis nDi.2.2.2.g01941 I
nDi.2.2.2.g04849 Dirofilaria immitis nDi.2.2.2.g04849 I
nDi.2.2.2.g10231 Dirofilaria immitis nDi.2.2.2.g10231 I
nDi.2.2.2.g10233 Dirofilaria immitis nDi.2.2.2.g10233 I
NECAME_02405 Necator americanus NECAME_02405 I
nOo.2.0.1.g00761 Onchocerca ochengi nOo.2.0.1.g00761 I
OESDEN_04362 Oesophagostomum dentatum OESDEN_04362 I
OFLC_0000114001 Onchocerca flexuosa OFLC_0000114001 I
RSKR_0000852700 Rhabditophanes kr3021 RSKR_0000852700 I
SBAD_0001187401 Soboliphyme baturini SBAD_0001187401 I
SCUD_0000035401 Schistosoma curassoni SCUD_0000035401 I
Sjc_0029840 Schistosoma japonicum Sjc_0029840 I
Smp_026270 Schistosoma mansoni Smp_026270 I
SROB_0001927701 Schistosoma rodhaini SROB_0001927701 I
SSLN_0000736601 Schistocephalus solidus SSLN_0000736601 N
SVUK_0000950901 Strongylus vulgaris SVUK_0000950901 I
T265_07014 Opisthorchis viverrini T265_07014 I
TASK_0000611101 Taenia asiatica TASK_0000611101 I
TCNE_0000904301 Toxocara canis TCNE_0000904301 I
TsM_000207500 Taenia solium TsM_000207500 I
TTAC_0000857601 Hydatigera taeniaeformis TTAC_0000857601 I
WBGene00241269 Onchocerca volvulus WBGene00241269 I
WUBG_00846 Wuchereria bancrofti WUBG_00846 I