CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB08G29560
(
Oryza brachyantha
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OB08G29560
T275374_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY
RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.879
0.935
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.879
0.935
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.794
0.882
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.678
0.731
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB08G29560.1
Myb
14
61
KGAWTKEEDERLVSYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
OB08G29560.1
Myb
67
112
RGNFTADEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHI
Links
Other
Myb/SANT
family TFs
Other
Oryza brachyantha
TFs
638 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOM031533
Anopheles coluzzii
ACOM031533
I
DUXA
Microcebus murinus
ENSMICG00000006042
I
DUXA
Tursiops truncatus
ENSTTRG00000014200
I
DUXA
Pan troglodytes
ENSPTRG00000028871
I
DUXA
Oryctolagus cuniculus
ENSOCUG00000011331
I
DUXA
Macaca mulatta
ENSMMUG00000007788
I
DUXA
Loxodonta africana
ENSLAFG00000030167
I
DUXA
Gorilla gorilla
ENSGGOG00000005650
I
DUXA
Homo sapiens
ENSG00000258873
D
DUXA
Felis catus
ENSFCAG00000007545
I
DUXA
Equus caballus
ENSECAG00000021112
I
DUXA
Canis familiaris
ENSCAFG00000002431
I
ENSAMEG00000004960
Ailuropoda melanoleuca
ENSAMEG00000004960
I
ENSBTAP00000049813-D1
Bos grunniens
ENSBTAP00000049813-D1
I
ENSCJAG00000021948
Callithrix jacchus
ENSCJAG00000021948
I
ENSCJAG00000031259
Callithrix jacchus
ENSCJAG00000031259
I
ENSCJAG00000032154
Callithrix jacchus
ENSCJAG00000032154
I
ENSCSAG00000001657
Chlorocebus sabaeus
ENSCSAG00000001657
I
ENSDNOG00000025505
Dasypus novemcinctus
ENSDNOG00000025505
I
ENSDNOG00000046863
Dasypus novemcinctus
ENSDNOG00000046863
I
ENSDNOG00000049160
Dasypus novemcinctus
ENSDNOG00000049160
I
ENSMICG00000006881
Microcebus murinus
ENSMICG00000006881
I
ENSMICG00000015060
Microcebus murinus
ENSMICG00000015060
I
ENSMMUP00000010232
Macaca fascicularis
ENSMMUP00000010232
I
ENSPANG00000009357
Papio anubis
ENSPANG00000009357
I
ENSPPYG00000010457
Pongo abelii
ENSPPYG00000010457
I
NEMVEDRAFT_v1g38792
Nematostella vectensis
NEMVEDRAFT_v1g38792
I
NEMVEDRAFT_v1g92436
Nematostella vectensis
NEMVEDRAFT_v1g92436
I
NEMVEDRAFT_v1g92500
Nematostella vectensis
NEMVEDRAFT_v1g92500
I