OBART04G08350 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART04G08350 T275501_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.909 0.989
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.909 0.989
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART04G08350.1 Myb 7 53
OBART04G08350.1 Myb 59 103

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARF7 Oryza sativa OS02G0557200 N
BGIOSGA008429 Oryza indica BGIOSGA008429 N
LPERR02G16580 Leersia perrieri LPERR02G16580 N
Lus10024455.g Linum usitatissimum Lus10024455.g N
MLOC_64596 Hordeum vulgare MLOC_64596 I
OBART02G20600 Oryza barthii OBART02G20600 N
OGLUM02G20880 Oryza glumaepatula OGLUM02G20880 N
OLONG_012362 Oryza longistaminata OLONG_012362 N
OMERI02G20310 Oryza meridionalis OMERI02G20310 N
ONIVA02G22590 Oryza nivara ONIVA02G22590 N
OPUNC02G18520 Oryza punctata OPUNC02G18520 N
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N
Sb04g022830 Sorghum bicolor Sb04g022830 N
VIT_18s0089g00910 Vitis vinifera VIT_18s0089g00910 N