OGLUM02G38510 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM02G38510 T275686_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.792 0.894
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.792 0.872
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.792 0.872
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.792 0.872
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.774 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G38510.2 Myb 644 694
OGLUM02G38510.3 Myb 639 689
OGLUM02G38510.4 Myb 653 703

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10000491 Chelonia mydas Cmyd_10000491 I 0.000
ENSAMEG00000016851 Ailuropoda melanoleuca ENSAMEG00000016851 I 0.000
ENSBTAP00000001420-D1 Bos grunniens ENSBTAP00000001420-D1 I 0.000
ENSCSAG00000011345 Chlorocebus sabaeus ENSCSAG00000011345 I 0.000
ENSETEG00000008987 Echinops telfairi ENSETEG00000008987 I 0.000
ENSLAFG00000007483 Loxodonta africana ENSLAFG00000007483 I 0.000
ENSLAFG00000028299 Loxodonta africana ENSLAFG00000028299 I 0.000
ENSLAFG00000030880 Loxodonta africana ENSLAFG00000030880 I 0.000
ENSLAFG00000032042 Loxodonta africana ENSLAFG00000032042 I 0.000
ENSMEUG00000013135 Macropus eugenii ENSMEUG00000013135 I 0.000
ENSMLUG00000006411 Myotis lucifugus ENSMLUG00000006411 I 0.000
ENSMLUG00000025140 Myotis lucifugus ENSMLUG00000025140 I 0.000
ENSMPUG00000009017 Mustela putorius furo ENSMPUG00000009017 I 0.000
ENSNLEG00000009730 Nomascus leucogenys ENSNLEG00000009730 I 0.000
ENSOARG00000015571 Ovis aries ENSOARG00000015571 I 0.000
ENSOCUG00000001138 Oryctolagus cuniculus ENSOCUG00000001138 I 0.000
ENSOCUG00000022109 Oryctolagus cuniculus ENSOCUG00000022109 I 0.000
ENSP00000269305 Macaca fascicularis ENSP00000269305 I 0.000
ENSPANG00000024061 Papio anubis ENSPANG00000024061 I 0.000
ENSPPYG00000007934 Pongo abelii ENSPPYG00000007934 I 0.000
ENSPSIG00000013302 Pelodiscus sinensis ENSPSIG00000013302 I 0.000
ENSSHAG00000015510 Sarcophilus harrisii ENSSHAG00000015510 I 0.000
ENSSTOG00000022774 Ictidomys tridecemlineatus ENSSTOG00000022774 I 0.000
LOC100910954 Rattus norvegicus ENSRNOG00000046657 I 0.000
Myotis_brandtii_TP53_10021059 Myotis brandtii Myotis_brandtii_TP53_10021059 I 0.000
Pvit_02042 Pogona vitticeps Pvit_02042 N 0.000
TP53 Erinaceus europaeus ENSEEUG00000014573 I 0.000
TP53 Bos taurus ENSBTAG00000001069 I 0.000
TP53 Canis familiaris ENSCAFG00000016714 I 0.000
TP53 Callithrix jacchus ENSCJAG00000014978 I 0.000
TP53 Cavia porcellus ENSCPOG00000014252 I 0.000
tp53 Danio rerio ENSDARG00000035559 I 0.000
TP53 Tursiops truncatus ENSTTRG00000010250 I 0.000
TP53 Dasypus novemcinctus ENSDNOG00000005252 I 0.000
TP53 Sus scrofa ENSSSCG00000017950 I 0.000
TP53 Equus caballus ENSECAG00000008126 I 0.000
TP53 Sorex araneus ENSSARG00000006206 I 0.000
Tp53 Rattus norvegicus ENSRNOG00000010756 I 0.000
TP53 Pan troglodytes ENSPTRG00000008703 I 0.000
TP53 Felis catus ENSFCAG00000009623 I 0.000
TP53 Homo sapiens ENSG00000141510 D 0.000
TP53 Procavia capensis ENSPCAG00000012725 I 0.000
TP53 Gorilla gorilla ENSGGOG00000009786 I 0.000
TP53 Otolemur garnettii ENSOGAG00000016871 I 0.000
TP53 Microcebus murinus ENSMICG00000014853 I 0.000
TP53 Macaca mulatta ENSMMUG00000008639 I 0.000
Trp53 Mus musculus ENSMUSG00000059552 D 0.000