Phatr3_EG01922 (Phaeodactylum tricornutum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Phatr3_EG01922 T277806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Thaps24118
M02334_2.00
Thalassiosira pseudonana
NNAYCHDNN

NNHDGRTNN
PBM
Weirauch et al.(2014)
pTH7881
0.901 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_EG01922.p1 Myb 117 162

Links

Other Myb/SANT family TFs
Other Phaeodactylum tricornutum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29569.m000148 Ricinus communis 29569.m000148 N
Aquca_058_00049 Aquilegia coerulea Aquca_058_00049 N
AT2G43280 Arabidopsis thaliana AT2G43280 N
Bo4g194230 Brassica oleracea Bo4g194230 N
Bra037723 Brassica rapa Bra037723 N
Bra037724 Brassica rapa Bra037724 N
Cagra.3706s0015 Capsella grandiflora Cagra.3706s0015 N
Carubv10024069m.g Capsella rubella Carubv10024069m.g N
cassava19693.m1 Manihot esculenta cassava19693.m1 N
cassava45111.m1 Manihot esculenta cassava45111.m1 N
chr3.CM0047.280.nc Lotus japonicus chr3.CM0047.280.nc N
Ciclev10022249m.g Citrus clementina Ciclev10022249m.g N
Cla017785 Citrullus lanatus Cla017785 N
Cucsa.242980 Cucumis sativus Cucsa.242980 N
Eucgr.A00087 Eucalyptus grandis Eucgr.A00087 N
Eucgr.A00281 Eucalyptus grandis Eucgr.A00281 N
fgenesh2_kg.4__2495__AT2G43280.1 Arabidopsis lyrata fgenesh2_kg.4__2495__AT2G43280.1 N
gene21668-v1.0-hybrid Fragaria vesca gene21668-v1.0-hybrid N
GLYMA04G12273 Glycine max GLYMA04G12273 N
GLYMA06G48170 Glycine max GLYMA06G48170 N
Gorai.005G128700 Gossypium raimondii Gorai.005G128700 N
MTR_3g006370 Medicago truncatula MTR_3g006370 N
orange1.1g030419m.g Citrus sinensis orange1.1g030419m.g N
PK06282.1 Cannabis sativa PK06282.1 N
POPTR_0017s05820 Populus trichocarpa POPTR_0017s05820 N
PRUPE_ppa011038mg Prunus persica PRUPE_ppa011038mg N
SapurV1A.1606s0030 Salix purpurea SapurV1A.1606s0030 N
SapurV1A.3204s0030 Salix purpurea SapurV1A.3204s0030 N
TCM_020035 Theobroma cacao TCM_020035 N
Thhalv10001648m.g Eutrema salsugineum Thhalv10001648m.g N
VIT_00s0174g00130 Vitis vinifera VIT_00s0174g00130 N