POPTR_0005s14450 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0005s14450 T278282_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.694 0.755
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s14450.1 Myb 9 56
POPTR_0005s14450.1 Myb 62 111

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_00928 Aspergillus nidulans CADANIAG00001727 D
CADAFLAG00001126 Aspergillus flavus CADAFLAG00001126 I
CADANGAG00001424 Aspergillus niger CADANGAG00001424 I
CH063_12421 Colletotrichum higginsianum CH063_12421 N
fgenesh1_pm.00042_#_359 Aspergillus carbonarius fgenesh1_pm.00042_#_359 I