CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0006s12820
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0006s12820
T278303_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0006s12820.1
Myb
443
492
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
POPTR_0006s12820.2
Myb
443
492
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
POPTR_0006s12820.3
Myb
443
492
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
POPTR_0006s12820.4
Myb
266
315
RMWTTPEVMKLIDGIAQYGTGRWTDIKKLMFSSTAYRTPIDLRDKWRNLL
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000007716
Gadus morhua
ENSGMOG00000007716
N
ENSMICG00000000950
Microcebus murinus
ENSMICG00000000950
N
ENSMODG00000006962
Monodelphis domestica
ENSMODG00000006962
N
ENSONIG00000009228
Oreochromis niloticus
ENSONIG00000009228
N
ENSTNIG00000001659
Tetraodon nigroviridis
ENSTNIG00000001659
N
ENSTRUG00000012490
Takifugu rubripes
ENSTRUG00000012490
N
ZBTB4
Felis catus
ENSFCAG00000029504
N