Sb02g033830 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb02g033830 T279145_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.738 0.849
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.689 0.753
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.689 0.753
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.689 0.753
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.661 0.731
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.661 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g033830.1 Myb 13 60
Sb02g033830.1 Myb 66 111

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

501 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005516 Oryza indica BGIOSGA005516 I
BGIOSGA022518 Oryza indica BGIOSGA022518 I
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I
F775_01928 Aegilops tauschii F775_01928 I
GRMZM2G033915 Zea mays GRMZM2G033915 I
GRMZM2G134552 Zea mays GRMZM2G134552 N
GRMZM2G165991 Zea mays GRMZM2G165991 I
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I
LPERR02G28190 Leersia perrieri LPERR02G28190 I
LPERR06G06210 Leersia perrieri LPERR06G06210 I
MLOC_17575 Hordeum vulgare MLOC_17575 I
OB06G16230 Oryza brachyantha OB06G16230 I
OBART06G06800 Oryza barthii OBART06G06800 I
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I
OMERI02G32570 Oryza meridionalis OMERI02G32570 I
OMERI06G07980 Oryza meridionalis OMERI06G07980 I
ONIVA02G36360 Oryza nivara ONIVA02G36360 I
ONIVA06G08110 Oryza nivara ONIVA06G08110 I
OPUNC02G31650 Oryza punctata OPUNC02G31650 I
OPUNC06G06450 Oryza punctata OPUNC06G06450 I
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I
OS02G0773600 Oryza sativa OS02G0773600 I
OS06G0207600 Oryza sativa OS06G0207600 I
Pavir.Aa00328 Panicum virgatum Pavir.Aa00328 N
Pavir.J23833 Panicum virgatum Pavir.J23833 I
Pavir.J25248 Panicum virgatum Pavir.J25248 I
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I
Sb04g034665 Sorghum bicolor Sb04g034665 N
Sb10g006810 Sorghum bicolor Sb10g006810 I
Si019733m.g Setaria italica Si019733m.g N
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I