Sb03g039470 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb03g039470 T279194_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.749 0.843
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.736 0.786
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.699 0.771
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.699 0.771
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.684 0.771
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g039470.1 Myb 65 111
Sb03g039470.1 Myb 117 163
Sb03g039470.1 Myb 169 214

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_03808 Schistosoma haematobium A_03808 N
csin102518 Clonorchis sinensis csin102518 N
D915_09108 Fasciola hepatica D915_09108 N
ECANG7_05291 Echinococcus canadensis ECANG7_05291 N
EmuJ_000712700 Echinococcus multilocularis EmuJ_000712700 N
HDID_0000996601 Hymenolepis diminuta HDID_0000996601 N
HmN_000525500 Hymenolepis microstoma HmN_000525500 N
HNAJ_0001235101 Hymenolepis nana HNAJ_0001235101 N
MCOS_0000898001 Mesocestoides corti MCOS_0000898001 N
SCUD_0000031701 Schistosoma curassoni SCUD_0000031701 N
Smp_138230 Schistosoma mansoni Smp_138230 N
SMU15015104 Schmidtea mediterranea SMU15015104 N
T265_06319 Opisthorchis viverrini T265_06319 N
TsM_001167900 Taenia solium TsM_001167900 N