VIT_16s0050g01180 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_16s0050g01180 T282076_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.878 0.978
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.870 0.935
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.870 0.935
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.870 0.935
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.870 0.935
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.870 0.935
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.868 0.957
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.868 0.957
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.868 0.957
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.870
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.803 0.891
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.803 0.891
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.803 0.891
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.737 0.717
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_16s0050g01180.t01 Myb 60 105

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

366 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAY96799 Xenopus tropicalis AAY96799 I
AAZ04408 Xenopus tropicalis AAZ04408 I
Alligator_sinensis_CCG015374.1 Alligator sinensis Alligator_sinensis_CCG015374.1 I
Cmyd_10015978 Chelonia mydas Cmyd_10015978 N
ENSAMEG00000015855 Ailuropoda melanoleuca ENSAMEG00000015855 I
ENSAMXG00000012278 Astyanax mexicanus ENSAMXG00000012278 I
ENSAMXG00000012796 Astyanax mexicanus ENSAMXG00000012796 I
ENSAPLG00000008077 Anas platyrhynchos ENSAPLG00000008077 I
ENSBTAP00000000742-D1 Bos grunniens ENSBTAP00000000742-D1 I
ENSBTAP00000028261-D1 Bos grunniens ENSBTAP00000028261-D1 I
ENSCPOG00000021042 Cavia porcellus ENSCPOG00000021042 I
ENSCSAG00000000668 Chlorocebus sabaeus ENSCSAG00000000668 I
ENSCSAG00000008869 Chlorocebus sabaeus ENSCSAG00000008869 I
ENSDORG00000014783 Dipodomys ordii ENSDORG00000014783 I
ENSFALG00000007228 Ficedula albicollis ENSFALG00000007228 I
ENSFALG00000007421 Ficedula albicollis ENSFALG00000007421 N
ENSGACG00000015969 Gasterosteus aculeatus ENSGACG00000015969 I
ENSGMOG00000000092 Gadus morhua ENSGMOG00000000092 I
ENSGMOG00000015708 Gadus morhua ENSGMOG00000015708 I
ENSGMOG00000018048 Gadus morhua ENSGMOG00000018048 I
ENSLACG00000009729 Latimeria chalumnae ENSLACG00000009729 I
ENSLACG00000017918 Latimeria chalumnae ENSLACG00000017918 I
ENSLOCG00000004988 Lepisosteus oculatus ENSLOCG00000004988 I
ENSLOCG00000007298 Lepisosteus oculatus ENSLOCG00000007298 I
ENSMEUG00000013941 Macropus eugenii ENSMEUG00000013941 I
ENSMICG00000012430 Microcebus murinus ENSMICG00000012430 I
ENSMODG00000019833 Monodelphis domestica ENSMODG00000019833 I
ENSMPUG00000003643 Mustela putorius furo ENSMPUG00000003643 I
ENSMPUG00000006870 Mustela putorius furo ENSMPUG00000006870 I
ENSMPUG00000013915 Mustela putorius furo ENSMPUG00000013915 I
ENSNLEG00000006836 Nomascus leucogenys ENSNLEG00000006836 I
ENSOARG00000007304 Ovis aries ENSOARG00000007304 I
ENSOARG00000020422 Ovis aries ENSOARG00000020422 I
ENSONIG00000002398 Oreochromis niloticus ENSONIG00000002398 I
ENSONIG00000002619 Oreochromis niloticus ENSONIG00000002619 I
ENSONIG00000010641 Oreochromis niloticus ENSONIG00000010641 I
ENSORLG00000004584 Oryzias latipes ENSORLG00000004584 I
ENSP00000232424 Macaca fascicularis ENSP00000232424 I
ENSPANG00000018250 Papio anubis ENSPANG00000018250 I
ENSPANG00000024455 Papio anubis ENSPANG00000024455 I
ENSPFOG00000016659 Poecilia formosa ENSPFOG00000016659 I
ENSPFOG00000019084 Poecilia formosa ENSPFOG00000019084 I
ENSPFOG00000022586 Poecilia formosa ENSPFOG00000022586 I
ENSPPYG00000014419 Pongo abelii ENSPPYG00000014419 I
ENSPSIG00000013040 Pelodiscus sinensis ENSPSIG00000013040 I
ENSPTRG00000023647 Pan troglodytes ENSPTRG00000023647 I
ENSPTRG00000039445 Pan troglodytes ENSPTRG00000039445 I
ENSSSCG00000024430 Sus scrofa ENSSSCG00000024430 I
ENSSSCG00000026362 Sus scrofa ENSSSCG00000026362 I
ENSSTOG00000026531 Ictidomys tridecemlineatus ENSSTOG00000026531 I
ENSTNIG00000007837 Tetraodon nigroviridis ENSTNIG00000007837 I
ENSTRUG00000001493 Takifugu rubripes ENSTRUG00000001493 I
ENSXMAG00000003794 Xiphophorus maculatus ENSXMAG00000003794 I
ENSXMAG00000004442 Xiphophorus maculatus ENSXMAG00000004442 I
estExt_fgenesh2_kg.C_140002 Branchiostoma floridae estExt_fgenesh2_kg.C_140002 I
estExt_fgenesh2_kg.C_9080002 Branchiostoma floridae estExt_fgenesh2_kg.C_9080002 I
estExt_fgenesh2_pg.C_2610041 Branchiostoma floridae estExt_fgenesh2_pg.C_2610041 I
estExt_fgenesh2_pg.C_2610044 Branchiostoma floridae estExt_fgenesh2_pg.C_2610044 I
estExt_fgenesh2_pg.C_3520029 Branchiostoma floridae estExt_fgenesh2_pg.C_3520029 I
estExt_fgenesh2_pg.C_3520032 Branchiostoma floridae estExt_fgenesh2_pg.C_3520032 I
estExt_fgenesh2_pg.C_3670032 Branchiostoma floridae estExt_fgenesh2_pg.C_3670032 I
estExt_GenewiseH_1.C_2610051 Branchiostoma floridae estExt_GenewiseH_1.C_2610051 I
estExt_GenewiseH_1.C_960240 Branchiostoma floridae estExt_GenewiseH_1.C_960240 I
hairy1 Gallus gallus ENSGALG00000002055 I
her6 Danio rerio ENSDARG00000006514 I
her6 Gasterosteus aculeatus ENSGACG00000009264 I
her6 Tetraodon nigroviridis ENSTNIG00000015567 I
her6 Takifugu rubripes ENSTRUG00000017395 I
her9 Danio rerio ENSDARG00000056438 I
her9 Gasterosteus aculeatus ENSGACG00000007334 I
her9 Takifugu rubripes ENSTRUG00000009985 I
HES1 Anolis carolinensis ENSACAG00000001611 I
HES1 Bos taurus ENSBTAG00000000569 I
HES1 Choloepus hoffmanni ENSCHOG00000005633 I
HES1 Callithrix jacchus ENSCJAG00000014044 I
HES1 Dasypus novemcinctus ENSDNOG00000039639 I
HES1 Equus caballus ENSECAG00000026945 I
HES1 Homo sapiens ENSG00000114315 D
HES1 Gorilla gorilla ENSGGOG00000008521 I
HES1 Loxodonta africana ENSLAFG00000008932 I
HES1 Meleagris gallopavo ENSMGAG00000007566 I
HES1 Myotis lucifugus ENSMLUG00000008549 I
Hes1 Mus musculus ENSMUSG00000022528 D
HES1 Ornithorhynchus anatinus ENSOANG00000015683 I
HES1 Oryctolagus cuniculus ENSOCUG00000009363 I
HES1 Otolemur garnettii ENSOGAG00000032425 I
hes1 Oryzias latipes ENSORLG00000007556 I
HES1 Pan troglodytes ENSPTRG00000015753 I
HES1 Pteropus vampyrus ENSPVAG00000015487 I
Hes1 Rattus norvegicus ENSRNOG00000001720 I
HES1 Tursiops truncatus ENSTTRG00000001687 I
hes1 Xenopus tropicalis XB-GENE-487995 I
hes1.L Xenopus laevis XB-GENE-865756 I
hes1.S Xenopus laevis XB-GENE-6256448 I
HES2 Procavia capensis ENSPCAG00000007135 I
HES4 Bos taurus ENSBTAG00000014705 I
HES4 Canis familiaris ENSCAFG00000019350 I
HES4 Dasypus novemcinctus ENSDNOG00000024495 I
HES4 Homo sapiens ENSG00000188290 I
HES4 Gorilla gorilla ENSGGOG00000013399 I
HES4 Microcebus murinus ENSMICG00000015660 I
HES4 Macaca mulatta ENSMMUG00000001817 I
HES4 Monodelphis domestica ENSMODG00000018647 I
hes4 Oryzias latipes ENSORLG00000005453 I
HES4 Pteropus vampyrus ENSPVAG00000010837 I
HES4 Taeniopygia guttata ENSTGUG00000009134 I
hes4 Xenopus tropicalis XB-GENE-487830 I
hes4.L Xenopus laevis XB-GENE-865740 I
hes4.S Xenopus laevis XB-GENE-6256031 I
Myotis_brandtii_Hes1_10032756 Myotis brandtii Myotis_brandtii_Hes1_10032756 I
Ogr04559 Ophisaurus gracilis Ogr04559 I
Ogr11517 Ophisaurus gracilis Ogr11517 I
Pvit_06331 Pogona vitticeps Pvit_06331 I
Pvit_14102 Pogona vitticeps Pvit_14102 I