Ca_14048 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_14048 T283030_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.875 0.957
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.875 0.957
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.875 0.957
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.875 0.935
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.875 0.935
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.867 0.913
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.857 0.891
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.857 0.891
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.857 0.891
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.852 0.891
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.829 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.829 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.829 0.870
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.704 0.674
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.704 0.674
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.704 0.674
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.672 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_14048 Myb 30 75

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

306 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29685.m000503 Ricinus communis 29685.m000503 N 0.000
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.000
Aquca_025_00175 Aquilegia coerulea Aquca_025_00175 N 0.000
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.000
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.000
cassava28226.m1 Manihot esculenta cassava28226.m1 N 0.000
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.000
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 0.000
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.000
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.000
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N 0.000
evm.TU.supercontig_113.2 Carica papaya evm.TU.supercontig_113.2 N 0.000
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.000
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.000
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.000
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.000
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.000
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.000
Gorai.011G195800 Gossypium raimondii Gorai.011G195800 N 0.000
MDP0000233216 Malus domestica MDP0000233216 N 0.000
MDP0000786741 Malus domestica MDP0000786741 N 0.000
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.000
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N 0.000
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.000
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.000
PDK_20s1722071g001 Phoenix dactylifera PDK_20s1722071g001 N 0.000
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.000
PK06148.1 Cannabis sativa PK06148.1 N 0.000
PK12746.1 Cannabis sativa PK12746.1 N 0.000
Pm003854 Prunus mume Pm003854 N 0.000
Pm008290 Prunus mume Pm008290 N 0.000
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N 0.000
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.000
POPTR_0008s10810 Populus trichocarpa POPTR_0008s10810 N 0.000
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 0.000
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.000
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.000
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.000
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.000
Solyc09g075640.2 Solanum lycopersicum Solyc09g075640.2 N 0.000
TCM_021310 Theobroma cacao TCM_021310 N 0.000
TCM_041141 Theobroma cacao TCM_041141 N 0.000
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.000
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.000
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.000
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.000
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.000
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.000