Pm025253 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm025253 T283613_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.884 0.957
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.801 0.870
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.801 0.870
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.801 0.870
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.801 0.870
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.801 0.870
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.793 0.848
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.793 0.848
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.793 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.782 0.848
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.773 0.804
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.773 0.804
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.737 0.804
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.737 0.804
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.706 0.674
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.706 0.674
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.706 0.674
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.699 0.696
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.699 0.696
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.699 0.696
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.699 0.674
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.699 0.674
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.699 0.674
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.689 0.652
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.689 0.652
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.689 0.652
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.665 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm025253 Myb 59 104

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

481 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002198 Calypte anna Aan_R002198 I 0.000
Aan_R002199 Calypte anna Aan_R002199 I 0.000
Afo_R012706 Aptenodytes forsteri Afo_R012706 I 0.000
Alligator_sinensis_CCG010010.1 Alligator sinensis Alligator_sinensis_CCG010010.1 I 0.000
ANCCAN_03137 Ancylostoma caninum ANCCAN_03137 N 0.000
ANCCAN_04270 Ancylostoma caninum ANCCAN_04270 N 0.000
ANCCEY_07283 Ancylostoma ceylanicum ANCCEY_07283 I 0.000
ASU_10957 Ascaris suum ASU_10957 N 0.000
Brh_R009368 Buceros rhinoceros Brh_R009368 I 0.000
Brh_R009982 Buceros rhinoceros Brh_R009982 I 0.000
BXY_1135400 Bursaphelenchus xylophilus BXY_1135400 N 0.000
CBG02662 Caenorhabditis briggsae CBG02662 N 0.000
CGI_10015578 Crassostrea gigas CGI_10015578 I 0.000
CLEC012897 Cimex lectularius CLEC012897 I 0.000
D917_06384 Trichinella nativa D917_06384 I 0.000
D918_05204 Trichuris suis D918_05204 I 0.000
DICVIV_06588 Dictyocaulus viviparus DICVIV_06588 N 0.000
DME_0000216501 Dracunculus medinensis DME_0000216501 N 0.000
ECANG7_01511 Echinococcus canadensis ECANG7_01511 I 0.000
EFV52712 Trichinella spiralis EFV52712 I 0.000
EFV52717 Trichinella spiralis EFV52717 I 0.000
EFV53100 Trichinella spiralis EFV53100 I 0.000
EmuJ_000457200 Echinococcus multilocularis EmuJ_000457200 I 0.000
ENSACAG00000008801 Anolis carolinensis ENSACAG00000008801 I 0.000
ENSAMEG00000000718 Ailuropoda melanoleuca ENSAMEG00000000718 I 0.000
ENSAMEG00000002558 Ailuropoda melanoleuca ENSAMEG00000002558 I 0.000
ENSAMXG00000010345 Astyanax mexicanus ENSAMXG00000010345 I 0.000
ENSAPLG00000013905 Anas platyrhynchos ENSAPLG00000013905 I 0.000
ENSAPLG00000014639 Anas platyrhynchos ENSAPLG00000014639 I 0.000
ENSCSAG00000007447 Chlorocebus sabaeus ENSCSAG00000007447 I 0.000
ENSCSAG00000015443 Chlorocebus sabaeus ENSCSAG00000015443 I 0.000
ENSDORG00000004800 Dipodomys ordii ENSDORG00000004800 I 0.000
ENSFALG00000012770 Ficedula albicollis ENSFALG00000012770 I 0.000
ENSFALG00000012772 Ficedula albicollis ENSFALG00000012772 I 0.000
ENSFALG00000013306 Ficedula albicollis ENSFALG00000013306 I 0.000
ENSGACG00000002672 Gasterosteus aculeatus ENSGACG00000002672 I 0.000
ENSGMOG00000009513 Gadus morhua ENSGMOG00000009513 I 0.000
ENSGMOG00000013321 Gadus morhua ENSGMOG00000013321 I 0.000
ENSGMOG00000017800 Gadus morhua ENSGMOG00000017800 I 0.000
ENSLACG00000007917 Latimeria chalumnae ENSLACG00000007917 I 0.000
ENSLACG00000016799 Latimeria chalumnae ENSLACG00000016799 I 0.000
ENSLOCG00000016336 Lepisosteus oculatus ENSLOCG00000016336 I 0.000
ENSLOCG00000016338 Lepisosteus oculatus ENSLOCG00000016338 I 0.000
ENSMGAG00000014245 Meleagris gallopavo ENSMGAG00000014245 I 0.000
ENSMGAG00000014248 Meleagris gallopavo ENSMGAG00000014248 I 0.000
ENSMICG00000005131 Microcebus murinus ENSMICG00000005131 I 0.000
ENSMPUG00000000601 Mustela putorius furo ENSMPUG00000000601 I 0.000
ENSNLEG00000000503 Nomascus leucogenys ENSNLEG00000000503 I 0.000
ENSNLEG00000011088 Nomascus leucogenys ENSNLEG00000011088 I 0.000
ENSOARG00000016395 Ovis aries ENSOARG00000016395 I 0.000
ENSOARG00000019518 Ovis aries ENSOARG00000019518 I 0.000
ENSOGAG00000033901 Otolemur garnettii ENSOGAG00000033901 I 0.000
ENSONIG00000006816 Oreochromis niloticus ENSONIG00000006816 I 0.000
ENSP00000201031 Macaca fascicularis ENSP00000201031 I 0.000
ENSPANG00000022354 Papio anubis ENSPANG00000022354 I 0.000
ENSPANG00000024505 Papio anubis ENSPANG00000024505 I 0.000
ENSPFOG00000015812 Poecilia formosa ENSPFOG00000015812 I 0.000
ENSPPYG00000016218 Pongo abelii ENSPPYG00000016218 I 0.000
ENSPSIG00000010979 Pelodiscus sinensis ENSPSIG00000010979 I 0.000
ENSSARG00000001996 Sorex araneus ENSSARG00000001996 I 0.000
ENSSHAG00000004162 Sarcophilus harrisii ENSSHAG00000004162 I 0.000
ENSSHAG00000011591 Sarcophilus harrisii ENSSHAG00000011591 I 0.000
ENSSSCG00000028059 Sus scrofa ENSSSCG00000028059 I 0.000
ENSSTOG00000014299 Ictidomys tridecemlineatus ENSSTOG00000014299 I 0.000
ENSSTOG00000019865 Ictidomys tridecemlineatus ENSSTOG00000019865 I 0.000
ENSTSYG00000003193 Tarsius syrichta ENSTSYG00000003193 I 0.000
ENSXMAG00000003446 Xiphophorus maculatus ENSXMAG00000003446 I 0.000
ENSXMAG00000006217 Xiphophorus maculatus ENSXMAG00000006217 I 0.000
EVEC_0000221401 Enterobius vermicularis EVEC_0000221401 I 0.000
GB50795 Apis mellifera GB50795 I 0.000
Gfo_R000727 Geospiza fortis Gfo_R000727 I 0.000
Gfo_R000728 Geospiza fortis Gfo_R000728 I 0.000
Gfo_R006498 Geospiza fortis Gfo_R006498 I 0.000
GPLIN_000656900 Globodera pallida GPLIN_000656900 N 0.000
GPLIN_001548200 Globodera pallida GPLIN_001548200 I 0.000
HMEL016834 Heliconius melpomene HMEL016834 I 0.000
HmN_000504100 Hymenolepis microstoma HmN_000504100 N 0.000
Hsal_09862--XP_394369.3_APIME Harpegnathos saltator Hsal_09862--XP_394369.3_APIME I 0.000
L596_g21158 Steinernema carpocapsae L596_g21158 N 0.000
L798_10151 Zootermopsis nevadensis L798_10151 I 0.000
L889_g15326 Steinernema feltiae L889_g15326 N 0.000
L893_g11991 Steinernema glaseri L893_g11991 N 0.000
L898_g10044 Steinernema monticolum L898_g10044 N 0.000
LCUP016885 Lucilia cuprina LCUP016885 I 0.000
Myotis_brandtii_Tfap2a_10010543 Myotis brandtii Myotis_brandtii_Tfap2a_10010543 I 0.000
nAv.1.0.1.g04903 Acanthocheilonema viteae nAv.1.0.1.g04903 I 0.000
nDi.2.2.2.g01985 Dirofilaria immitis nDi.2.2.2.g01985 N 0.000
NECAME_08596 Necator americanus NECAME_08596 N 0.000
nRc.2.0.1.g41867 Romanomermis culicivorax nRc.2.0.1.g41867 N 0.000
NV15391 Nasonia vitripennis NV15391 I 0.000
Ocbimv22034917m.g Octopus bimaculoides Ocbimv22034917m.g I 0.000
OESDEN_04966 Oesophagostomum dentatum OESDEN_04966 N 0.000
OFLC_0001336001 Onchocerca flexuosa OFLC_0001336001 N 0.000
PEQ_0000626601 Parascaris equorum PEQ_0000626601 I 0.000
PPAI010539 Phlebotomus papatasi PPAI010539 I 0.000
PTRK_0000198500 Parastrongyloides trichosuri PTRK_0000198500 N 0.000
Pvit_00888 Pogona vitticeps Pvit_00888 I 0.000
Pvit_11230 Pogona vitticeps Pvit_11230 I 0.000
RSKR_0000054900 Rhabditophanes kr3021 RSKR_0000054900 N 0.000
RSKR_0000317700 Rhabditophanes kr3021 RSKR_0000317700 N 0.000
SINV20019 Solenopsis invicta SINV20019 I 0.000
SNAPOd2T00019365001 Oikopleura dioica SNAPOd2T00019365001 I 0.000
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf31395-processed-gene-0.2 I 0.000
SPAL_0000440800 Strongyloides papillosus SPAL_0000440800 N 0.000
SPER_0000909201 Spirometra erinaceieuropaei SPER_0000909201 I 0.000
SPU_016685 Strongylocentrotus purpuratus SPU_016685 I 0.000
SSLN_0000471801 Schistocephalus solidus SSLN_0000471801 I 0.000
SSTP_0000151700 Strongyloides stercoralis SSTP_0000151700 N 0.000
SSTP_0000963500 Strongyloides stercoralis SSTP_0000963500 N 0.000
SVE_0536700 Strongyloides venezuelensis SVE_0536700 N 0.000
SVUK_0000972601 Strongylus vulgaris SVUK_0000972601 N 0.000
T265_12481 Opisthorchis viverrini T265_12481 I 0.000
Tal_R008010 Tyto alba Tal_R008010 I 0.000
TFAP2A Bos taurus ENSBTAG00000001250 I 0.000
TFAP2A Canis familiaris ENSCAFG00000009658 I 0.000
TFAP2A Callithrix jacchus ENSCJAG00000021312 I 0.000
TFAP2A Cavia porcellus ENSCPOG00000000121 I 0.000
TFAP2A Dasypus novemcinctus ENSDNOG00000045908 I 0.000
TFAP2A Equus caballus ENSECAG00000017468 I 0.000
TFAP2A Echinops telfairi ENSETEG00000017102 I 0.000
TFAP2A Homo sapiens ENSG00000137203 D 0.000
TFAP2A Gallus gallus ENSGALG00000012775 I 0.000
TFAP2A Gorilla gorilla ENSGGOG00000007542 I 0.000
TFAP2A Loxodonta africana ENSLAFG00000011386 I 0.000
TFAP2A Myotis lucifugus ENSMLUG00000011477 I 0.000
TFAP2A Macaca mulatta ENSMMUG00000006186 I 0.000
TFAP2A Monodelphis domestica ENSMODG00000010299 I 0.000
TFAP2A Ornithorhynchus anatinus ENSOANG00000007183 I 0.000
TFAP2A Oryctolagus cuniculus ENSOCUG00000005315 I 0.000
TFAP2A Otolemur garnettii ENSOGAG00000003629 I 0.000
TFAP2A Ochotona princeps ENSOPRG00000014292 I 0.000
TFAP2A Pan troglodytes ENSPTRG00000017714 I 0.000
TFAP2A Pteropus vampyrus ENSPVAG00000000240 I 0.000
Tfap2a Rattus norvegicus ENSRNOG00000015522 I 0.000
tfap2a.S Xenopus laevis XB-GENE-865453 I 0.000
TFAP2B Anolis carolinensis ENSACAG00000005251 I 0.000
tfap2b Danio rerio ENSDARG00000012667 I 0.000
tfap2b Gasterosteus aculeatus ENSGACG00000007277 I 0.000
TFAP2B Gallus gallus ENSGALG00000016680 I 0.000
TFAP2B Loxodonta africana ENSLAFG00000027209 I 0.000
TFAP2B Taeniopygia guttata ENSTGUG00000013267 I 0.000
tfap2b Xenopus tropicalis XB-GENE-485026 I 0.000
tfap2b.L Xenopus laevis XB-GENE-1188127 I 0.000
TFAP2C Canis familiaris ENSCAFG00000011996 I 0.000
TFAP2C Cavia porcellus ENSCPOG00000023253 I 0.000
TFAP2C Felis catus ENSFCAG00000005551 I 0.000
tfap2c Gasterosteus aculeatus ENSGACG00000005944 I 0.000
TFAP2C Macaca mulatta ENSMMUG00000009364 I 0.000
TFAP2C Monodelphis domestica ENSMODG00000016445 I 0.000
TFAP2C Ornithorhynchus anatinus ENSOANG00000009253 I 0.000
TFAP2C Pteropus vampyrus ENSPVAG00000015403 I 0.000
Tfap2c Rattus norvegicus ENSRNOG00000005246 I 0.000
TFAP2C Sus scrofa ENSSSCG00000007499 I 0.000
tfap2c.S Xenopus laevis XB-GENE-865803 I 0.000
TFAP2D Erinaceus europaeus ENSEEUG00000012106 I 0.000
TFAP2D Echinops telfairi ENSETEG00000006632 I 0.000
TFAP2D Gallus gallus ENSGALG00000019842 I 0.000
TFAP2D Taeniopygia guttata ENSTGUG00000013264 I 0.000
TFAP2E Cavia porcellus ENSCPOG00000024445 I 0.000
TFAP2E Pan troglodytes ENSPTRG00000000523 I 0.000
tfap2e Xenopus tropicalis XB-GENE-876803 I 0.000
tfap2e.L Xenopus laevis XB-GENE-876809 I 0.000
TsM_000500400 Taenia solium TsM_000500400 I 0.000
TTRE_0000281201 Trichuris trichiura TTRE_0000281201 I 0.000
WBGene00237271 Onchocerca volvulus WBGene00237271 N 0.000
WBGene00238500 Onchocerca volvulus WBGene00238500 N 0.000