Bostr.0568s0206 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.0568s0206 T285664_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.903 0.946
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.903 0.946
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0568s0206.1.p Myb 14 62
Bostr.0568s0206.1.p Myb 68 113

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

478 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH47 Arabidopsis thaliana AT3G47640 N
Bostr.18473s0193 Boechera stricta Bostr.18473s0193 N
Cagra.1659s0007 Capsella grandiflora Cagra.1659s0007 N
Carubv10017931m.g Capsella rubella Carubv10017931m.g N
cassava17541.valid.m1 Manihot esculenta cassava17541.valid.m1 N
Eucgr.B00470 Eucalyptus grandis Eucgr.B00470 N
evm.TU.contig_30141.2 Carica papaya evm.TU.contig_30141.2 N
Gorai.007G036700 Gossypium raimondii Gorai.007G036700 N
PK09009.1 Cannabis sativa PK09009.1 N
POPTR_0003s07200 Populus trichocarpa POPTR_0003s07200 N
PRUPE_ppa010295mg Prunus persica PRUPE_ppa010295mg N
PYE Arabidopsis lyrata fgenesh2_kg.5__1121__AT3G47640.1 N
Thhalv10010670m.g Eutrema salsugineum Thhalv10010670m.g N