CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.23794s0389
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.23794s0389
T285768_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.23794s0389.1.p
Myb
312
361
RMWTVDEVMKLVDGISHFGVGKWTDIKNLFFHSAAHRTPIDIRDKWRNLL
Bostr.23794s0389.2.p
Myb
260
309
RMWTVDEVMKLVDGISHFGVGKWTDIKNLFFHSAAHRTPIDIRDKWRNLL
Bostr.23794s0389.3.p
Myb
260
309
RMWTVDEVMKLVDGISHFGVGKWTDIKNLFFHSAAHRTPIDIRDKWRNLL
Bostr.23794s0389.4.p
Myb
260
309
RMWTVDEVMKLVDGISHFGVGKWTDIKNLFFHSAAHRTPIDIRDKWRNLL
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g031460
Brassica oleracea
Bo3g031460
N
0.721
Bra023092
Brassica rapa
Bra023092
N
0.699
Cagra.0666s0044
Capsella grandiflora
Cagra.0666s0044
N
0.909
Carubv10024894m.g
Capsella rubella
Carubv10024894m.g
N
0.909
Ciclev10011603m.g
Citrus clementina
Ciclev10011603m.g
N
0.770
Eucgr.K01251
Eucalyptus grandis
Eucgr.K01251
N
0.668
evm.TU.supercontig_92.112
Carica papaya
evm.TU.supercontig_92.112
N
0.759
orange1.1g011420m.g
Citrus sinensis
orange1.1g011420m.g
N
0.770
Thhalv10016738m.g
Eutrema salsugineum
Thhalv10016738m.g
N
0.873
TRFL8
Arabidopsis thaliana
AT2G37025
N
0.734
TRFL8
Arabidopsis lyrata
fgenesh2_kg.4__1746__AT2G37025.1
N
0.850