Carubv10012777m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10012777m.g T286321_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10012777m Myb 23 47

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30005.m001245 Ricinus communis 30005.m001245 N 0.746
BGIOSGA028509 Oryza indica BGIOSGA028509 N 0.682
Bra011042 Brassica rapa Bra011042 N 0.753
Cla005572 Citrullus lanatus Cla005572 N 0.700
evm.TU.supercontig_817.1 Carica papaya evm.TU.supercontig_817.1 N 0.715
e_gw1.141.94.1 Physcomitrella patens e_gw1.141.94.1 N 0.735
F775_00616 Aegilops tauschii F775_00616 N 0.704
F775_22357 Aegilops tauschii F775_22357 N 0.672
GRMZM2G162409 Zea mays GRMZM2G162409 I 0.704
LjSGA_045379.1 Lotus japonicus LjSGA_045379.1 N 0.767
LjSGA_102149.2 Lotus japonicus LjSGA_102149.2 N 0.700
MLOC_63597 Hordeum vulgare MLOC_63597 I 0.700
OGLUM08G12590 Oryza glumaepatula OGLUM08G12590 I 0.697
OLONG_004751 Oryza longistaminata OLONG_004751 N 0.732
OMERI02G34900 Oryza meridionalis OMERI02G34900 N 0.680
OPUNC02G34240 Oryza punctata OPUNC02G34240 N 0.680
OPUNC08G10730 Oryza punctata OPUNC08G10730 N 0.682
orange1.1g038008m.g Citrus sinensis orange1.1g038008m.g N 0.682
OS08G0346400 Oryza sativa OS08G0346400 I 0.697
Pavir.Ba02286 Panicum virgatum Pavir.Ba02286 N 0.796
PDK_20s1744641g001 Phoenix dactylifera PDK_20s1744641g001 N 0.705
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.700
PRUPE_ppa007491m2g Prunus persica PRUPE_ppa007491m2g N 0.715
PRUPE_ppa025217mg Prunus persica PRUPE_ppa025217mg N 0.734