evm.TU.supercontig_2.186 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_2.186 T287101_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.862 0.936
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.813 0.915
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.813 0.915
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.802 0.894
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.797 0.894
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.795 0.894
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.682 0.809
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.668 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_2.186 Myb 225 275

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

468 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011464 Calypte anna Aan_R011464 N
Alligator_sinensis_CCG016667.1 Alligator sinensis Alligator_sinensis_CCG016667.1 N
Cmyd_10010458 Chelonia mydas Cmyd_10010458 N
ENSAPLG00000014876 Anas platyrhynchos ENSAPLG00000014876 N
ENSBTAP00000020376-D1 Bos grunniens ENSBTAP00000020376-D1 N
ENSFALG00000012590 Ficedula albicollis ENSFALG00000012590 N
ENSLACG00000008926 Latimeria chalumnae ENSLACG00000008926 N
ENSLOCG00000017240 Lepisosteus oculatus ENSLOCG00000017240 N
ENSMPUG00000013360 Mustela putorius furo ENSMPUG00000013360 N
ENSNLEG00000004772 Nomascus leucogenys ENSNLEG00000004772 N
ENSOARG00000003358 Ovis aries ENSOARG00000003358 N
ENSP00000362013 Macaca fascicularis ENSP00000362013 N
ENSPANG00000009451 Papio anubis ENSPANG00000009451 N
ENSPPYG00000016614 Pongo abelii ENSPPYG00000016614 N
ENSPSIG00000009755 Pelodiscus sinensis ENSPSIG00000009755 N
ENSSHAG00000004599 Sarcophilus harrisii ENSSHAG00000004599 N
ENSSTOG00000022996 Ictidomys tridecemlineatus ENSSTOG00000022996 N
ENSTBEG00000012133 Tupaia belangeri ENSTBEG00000012133 N
ENSTSYG00000003874 Tarsius syrichta ENSTSYG00000003874 N
Myotis_brandtii_Trerf1_10015386 Myotis brandtii Myotis_brandtii_Trerf1_10015386 N
Ogr07462 Ophisaurus gracilis Ogr07462 N
Pvit_13408 Pogona vitticeps Pvit_13408 N
TRERF1 Taeniopygia guttata ENSTGUG00000003250 N
TRERF1 Tursiops truncatus ENSTTRG00000014065 N
TRERF1 Sus scrofa ENSSSCG00000001639 N
TRERF1 Anolis carolinensis ENSACAG00000001080 N
trerf1 Xenopus tropicalis XB-GENE-940630 N
TRERF1 Gorilla gorilla ENSGGOG00000012813 N
TRERF1 Canis familiaris ENSCAFG00000001642 N
TRERF1 Choloepus hoffmanni ENSCHOG00000006120 N
TRERF1 Callithrix jacchus ENSCJAG00000004347 N
TRERF1 Cavia porcellus ENSCPOG00000015717 N
TRERF1 Equus caballus ENSECAG00000016971 N
TRERF1 Felis catus ENSFCAG00000011210 N
TRERF1 Homo sapiens ENSG00000124496 N
TRERF1 Gallus gallus ENSGALG00000009896 N
Trerf1 Rattus norvegicus ENSRNOG00000022598 N
TRERF1 Loxodonta africana ENSLAFG00000007825 N
TRERF1 Meleagris gallopavo ENSMGAG00000013894 N
TRERF1 Myotis lucifugus ENSMLUG00000016748 N
TRERF1 Monodelphis domestica ENSMODG00000019042 N
TRERF1 Ornithorhynchus anatinus ENSOANG00000008467 N
TRERF1 Otolemur garnettii ENSOGAG00000025610 N
TRERF1 Pteropus vampyrus ENSPVAG00000007626 N