gene19115-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene19115-v1.0-hybrid T287339_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.664 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna19115.1-v1.0-hybrid Myb 63 109
mrna19115.1-v1.0-hybrid Myb 115 161
mrna19115.1-v1.0-hybrid Myb 167 209

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin109208 Clonorchis sinensis csin109208 I 0.000
EmuJ_000768500 Echinococcus multilocularis EmuJ_000768500 N 0.000
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.000
SMU15031708 Schmidtea mediterranea SMU15031708 I 0.000
SMU15033928 Schmidtea mediterranea SMU15033928 I 0.000
T265_00048 Opisthorchis viverrini T265_00048 I 0.000
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.000