CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.001G059600
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.001G059600
T287451_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G059600.1
Myb
790
849
RNKWTSEEVKKLIKMRGELHSRFQVLKGRMALWEEISASLLADGISRSPVQCKSRWASLV
Gorai.001G059600.2
Myb
790
849
RNKWTSEEVKKLIKMRGELHSRFQVLKGRMALWEEISASLLADGISRSPVQCKSRWASLV
Gorai.001G059600.3
Myb
790
849
RNKWTSEEVKKLIKMRGELHSRFQVLKGRMALWEEISASLLADGISRSPVQCKSRWASLV
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00241540
Amborella trichopoda
AMTR_s00009p00241540
N
0.730
Bo3g103450
Brassica oleracea
Bo3g103450
N
0.725
Bostr.0568s0468
Boechera stricta
Bostr.0568s0468
N
0.725
Bra038629
Brassica rapa
Bra038629
N
0.725
Cagra.0248s0020
Capsella grandiflora
Cagra.0248s0020
N
0.724
Carubv10027519m.g
Capsella rubella
Carubv10027519m.g
N
0.724
Ciclev10018763m.g
Citrus clementina
Ciclev10018763m.g
N
0.664
emb2746
Arabidopsis thaliana
AT5G63420
N
0.704
emb2746
Vitis vinifera
VIT_17s0000g01640
N
0.742
gene06358-v1.0-hybrid
Fragaria vesca
gene06358-v1.0-hybrid
N
0.725
gene06360-v1.0-hybrid
Fragaria vesca
gene06360-v1.0-hybrid
N
0.725
GLYMA06G17980
Glycine max
GLYMA06G17980
N
0.681
GLYMA17G13780
Glycine max
GLYMA17G13780
N
0.672
Lus10016758.g
Linum usitatissimum
Lus10016758.g
N
0.709
MDP0000313526
Malus domestica
MDP0000313526
N
0.715
MDP0000574910
Malus domestica
MDP0000574910
N
0.715
mgf010338m
Mimulus guttatus
mgf010338m
N
0.668
orange1.1g016319m.g
Citrus sinensis
orange1.1g016319m.g
N
0.683
orange1.1g040954m.g
Citrus sinensis
orange1.1g040954m.g
N
0.664
PDK_20s1433191g001
Phoenix dactylifera
PDK_20s1433191g001
N
0.661
Pm024489
Prunus mume
Pm024489
N
0.715
POPTR_0012s09780
Populus trichocarpa
POPTR_0012s09780
N
0.682
PRUPE_ppa001238mg
Prunus persica
PRUPE_ppa001238mg
N
0.715
SapurV1A.0841s0060
Salix purpurea
SapurV1A.0841s0060
N
0.672
Thhalv10003624m.g
Eutrema salsugineum
Thhalv10003624m.g
N
0.725