CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.002G247800
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.002G247800
T287503_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G247800.1
Myb
348
397
RMWTLAEVIKLVDGIAQYGVGRWTDIKKLLFASSAYRTPVDLRDKWRNLL
Gorai.002G247800.2
Myb
348
397
RMWTLAEVIKLVDGIAQYGVGRWTDIKKLLFASSAYRTPVDLRDKWRNLL
Gorai.002G247800.3
Myb
348
397
RMWTLAEVIKLVDGIAQYGVGRWTDIKKLLFASSAYRTPVDLRDKWRNLL
Gorai.002G247800.4
Myb
282
331
RMWTLAEVIKLVDGIAQYGVGRWTDIKKLLFASSAYRTPVDLRDKWRNLL
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMEUG00000006160
Macropus eugenii
ENSMEUG00000006160
N
ENSSHAG00000014550
Sarcophilus harrisii
ENSSHAG00000014550
N
PRDM2
Choloepus hoffmanni
ENSCHOG00000003382
N
Prdm2
Mus musculus
ENSMUSG00000057637
N
PRDM2
Pteropus vampyrus
ENSPVAG00000009935
N
Prdm2
Rattus norvegicus
ENSRNOG00000033522
N
prdm2.S
Xenopus laevis
XB-GENE-5957570
N