CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Prdm2
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000033522
T109203_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000046011
C2H2 ZF
355
377
FPCQHCERKFATKQGLERHMHIH
ENSRNOP00000046011
C2H2 ZF
385
407
FKCKYCGKRFGTQINRRRHERRH
ENSRNOP00000072686
C2H2 ZF
355
377
FPCQHCERKFATKQGLERHMHIH
ENSRNOP00000072686
C2H2 ZF
385
407
FKCKYCGKRFGTQINRRRHERRH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRDM2
Choloepus hoffmanni
ENSCHOG00000003382
N
0.827
Prdm2
Mus musculus
ENSMUSG00000057637
N
0.827
PRDM2
Pteropus vampyrus
ENSPVAG00000009935
N
0.827
ENSMEUG00000006160
Macropus eugenii
ENSMEUG00000006160
N
0.822
ENSSHAG00000014550
Sarcophilus harrisii
ENSSHAG00000014550
N
0.822
Pvit_10002
Pogona vitticeps
Pvit_10002
N
0.822
prdm2.S
Xenopus laevis
XB-GENE-5957570
N
0.822