MDP0000244794 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000244794 T288475_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK05732.1
M01276_2.00
Cannabis sativa
HNATTCBNN

NNVGAATND
PBM
Lambert et al.(2019)
pTH11367
0.752 0.851
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.676 0.702
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.665 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000244794 Myb 33 84

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA018023 Oryza indica BGIOSGA018023 N
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N
F775_32837 Aegilops tauschii F775_32837 N
GRMZM2G104400 Zea mays GRMZM2G104400 N
LPERR05G13650 Leersia perrieri LPERR05G13650 N
OB05G25040 Oryza brachyantha OB05G25040 N
OBART05G17230 Oryza barthii OBART05G17230 N
OGLUM05G18240 Oryza glumaepatula OGLUM05G18240 N
OMERI05G14890 Oryza meridionalis OMERI05G14890 N
ONIVA05G17930 Oryza nivara ONIVA05G17930 N
OPUNC05G15090 Oryza punctata OPUNC05G15090 N
ORGLA05G0148600 Oryza glaberrima ORGLA05G0148600 N
ORUFI05G18410 Oryza rufipogon ORUFI05G18410 N
OS05G0426200 Oryza sativa OS05G0426200 N
Pavir.J02083 Panicum virgatum Pavir.J02083 N
Pavir.J07259 Panicum virgatum Pavir.J07259 N
Sb09g020880 Sorghum bicolor Sb09g020880 N
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N
TRIUR3_22935 Triticum urartu TRIUR3_22935 N