CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ab03236
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ab03236
T289003_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ab03236.3.p
Myb
552
602
SAPWSEEELDFLWIGVRRYGVNNWNAMLRDTRLRFSNSRMAEDLAKQWCKE
Pavir.Ab03236.4.p
Myb
552
602
SAPWSEEELDFLWIGVRRYGVNNWNAMLRDTRLRFSNSRMAEDLAKQWCKE
Pavir.Ab03236.5.p
Myb
552
602
SAPWSEEELDFLWIGVRRYGVNNWNAMLRDTRLRFSNSRMAEDLAKQWCKE
Pavir.Ab03236.6.p
Myb
552
602
SAPWSEEELDFLWIGVRRYGVNNWNAMLRDTRLRFSNSRMAEDLAKQWCKE
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pc24g01490
Penicillium chrysogenum
Pc24g01490
N
Pc24g01720
Penicillium chrysogenum
Pc24g01720
N
PCH_Pc24g00840
Penicillium rubens
PCH_Pc24g00840
N
PCH_Pc24g01490
Penicillium rubens
PCH_Pc24g01490
N
PCH_Pc24g01720
Penicillium rubens
PCH_Pc24g01720
N
U727_0042991001
Penicillium solitum
U727_0042991001
N