Pavir.Ea01343 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ea01343 T289128_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYBP_MAIZE
M11057_2.00 		Zea mays
ACCWACCHN
NDGGTWGGT		 Transfac
Matys et al.(2006)
P$P_01 		0.699 0.759
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea01343.1.p Myb 14 61
Pavir.Ea01343.1.p Myb 67 111

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB000417 Anopheles albimanus AALB000417 N
AALB008493 Anopheles albimanus AALB008493 N
AARA011013 Anopheles arabiensis AARA011013 N
AATE002453 Anopheles atroparvus AATE002453 N
ACEP16054 Atta cephalotes ACEP16054 N
ACEP16128 Atta cephalotes ACEP16128 N
ACEP18777 Atta cephalotes ACEP18777 N
ACHR005918 Anopheles christyi ACHR005918 N
ACHR009374 Anopheles christyi ACHR009374 N
ACUA008906 Anopheles culicifacies ACUA008906 N
ACUA018702 Anopheles culicifacies ACUA018702 N
ACUA028082 Anopheles culicifacies ACUA028082 N
ADAC010198 Anopheles darlingi ADAC010198 N
ADIR010892 Anopheles dirus ADIR010892 N
AEPI001841 Anopheles epiroticus AEPI001841 N
AEPI001845 Anopheles epiroticus AEPI001845 N
AEPI004511 Anopheles epiroticus AEPI004511 N
Afo_R005342 Aptenodytes forsteri Afo_R005342 N
AFUN001004 Anopheles funestus AFUN001004 N
AFUN010567 Anopheles funestus AFUN010567 N
AGAP011712 Anopheles gambiae AGAP011712 N
Alligator_sinensis_CCG010046.1 Alligator sinensis Alligator_sinensis_CCG010046.1 N
AMEM005938 Anopheles merus AMEM005938 N
AMEM014364 Anopheles merus AMEM014364 N
AMIN000991 Anopheles minimus AMIN000991 N
AMIN008749 Anopheles minimus AMIN008749 N
ANCCAN_04327 Ancylostoma caninum ANCCAN_04327 N
ANCCEY_00583 Ancylostoma ceylanicum ANCCEY_00583 N
ANCDUO_17822 Ancylostoma duodenale ANCDUO_17822 N
ANCDUO_24135 Ancylostoma duodenale ANCDUO_24135 N
ANCDUO_27140 Ancylostoma duodenale ANCDUO_27140 N
AQUA000257 Anopheles quadriannulatus AQUA000257 N
AQUA010449 Anopheles quadriannulatus AQUA010449 N
ASTEI10438 Anopheles stephensi ASTEI10438 N
A_04261 Schistosoma haematobium A_04261 N
BGIBMGA003174 Bombyx mori BGIBMGA003174 N
BGIBMGA006719 Bombyx mori BGIBMGA006719 N
BGIBMGA012898 Bombyx mori BGIBMGA012898 N
BGLB011455 Biomphalaria glabrata BGLB011455 N
Bm3498 Brugia malayi Bm3498 I
Brh_R011566 Buceros rhinoceros Brh_R011566 N
Cflo_02417--XP_001121225.1_APIME Camponotus floridanus Cflo_02417--XP_001121225.1_APIME N
CLEC007098 Cimex lectularius CLEC007098 N
D915_02167 Fasciola hepatica D915_02167 N
DME_0000818901 Dracunculus medinensis DME_0000818901 N
ECANG7_07880 Echinococcus canadensis ECANG7_07880 N
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N
ENSCJAG00000000826 Callithrix jacchus ENSCJAG00000000826 N
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I
ENSDORG00000012736 Dipodomys ordii ENSDORG00000012736 I
ENSETEG00000007920 Echinops telfairi ENSETEG00000007920 N
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I
ENSOANG00000029773 Ornithorhynchus anatinus ENSOANG00000029773 I
ENSPCAG00000011680 Procavia capensis ENSPCAG00000011680 N
ENSTRUG00000007811 Takifugu rubripes ENSTRUG00000007811 N
ENSXMAG00000005990 Xiphophorus maculatus ENSXMAG00000005990 N
GD16691 Drosophila simulans FBgn0188280 N
GF19461 Drosophila ananassae FBgn0096470 N
GG18707 Drosophila erecta FBgn0110916 N
GPUH_0002190501 Gongylonema pulchrum GPUH_0002190501 N
HCOI01136500 Haemonchus contortus HCOI01136500 N
HHAL010563-PA Halyomorpha halys HHAL010563-PA N
HMEL004264 Heliconius melpomene HMEL004264 N
Hsal_04126--XP_001122560.1_APIME Harpegnathos saltator Hsal_04126--XP_001122560.1_APIME I
Hsal_09269--XP_394607.3_APIME Harpegnathos saltator Hsal_09269--XP_394607.3_APIME N
ISCW019287 Ixodes scapularis ISCW019287 N
KGM_15500 Danaus plexippus KGM_15500 N
L798_01365 Zootermopsis nevadensis L798_01365 N
L798_14238 Zootermopsis nevadensis L798_14238 N
L892_g20532 Steinernema scapterisci L892_g20532 N
LCUP008640 Lucilia cuprina LCUP008640 N
LDEC010813 Leptinotarsa decemlineata LDEC010813 N
MCINX015508 Melitaea cinxia MCINX015508 N
NBR_0001177301 Nippostrongylus brasiliensis NBR_0001177301 N
NECAME_11635 Necator americanus NECAME_11635 N
NECAME_19347 Necator americanus NECAME_19347 N
nOo.2.0.1.g12879 Onchocerca ochengi nOo.2.0.1.g12879 N
OESDEN_02780 Oesophagostomum dentatum OESDEN_02780 N
OESDEN_07954 Oesophagostomum dentatum OESDEN_07954 N
OFLC_0001184101 Onchocerca flexuosa OFLC_0001184101 N
Ogr11253 Ophisaurus gracilis Ogr11253 N
PPA14512 Pristionchus pacificus PPA14512 N
PPAI002123 Phlebotomus papatasi PPAI002123 N
PPAI007567 Phlebotomus papatasi PPAI007567 N
PXEA_0000704401 Protopolystoma xenopodis PXEA_0000704401 N
PXEA_0001803801 Protopolystoma xenopodis PXEA_0001803801 N
SINV10951 Solenopsis invicta SINV10951 N
SINV16738 Solenopsis invicta SINV16738 N
SINV17750 Solenopsis invicta SINV17750 I
SINV20004 Solenopsis invicta SINV20004 N
Smp_156650 Schistosoma mansoni Smp_156650 N
SMTD_0001100101 Schistosoma mattheei SMTD_0001100101 N
SMUV_0000075501 Syphacia muris SMUV_0000075501 N
SNAPOd2T00025688001 Oikopleura dioica SNAPOd2T00025688001 N
SPER_0002063901 Spirometra erinaceieuropaei SPER_0002063901 N
SPER_0003769001 Spirometra erinaceieuropaei SPER_0003769001 N
SPER_0003779701 Spirometra erinaceieuropaei SPER_0003779701 N
Tal_R004166 Tyto alba Tal_R004166 N
Tal_R010698 Tyto alba Tal_R010698 N
TBX10 Canis familiaris ENSCAFG00000011264 I
TBX15 Bos taurus ENSBTAG00000007767 I
Tbx22 Mus musculus ENSMUSG00000031241 I
TBX5 Vicugna pacos ENSVPAG00000009445 I
TELCIR_17829 Teladorsagia circumcincta TELCIR_17829 N
TRE_0001207201 Trichobilharzia regenti TRE_0001207201 N
TsM_001062700 Taenia solium TsM_001062700 N
YQE_06268 Dendroctonus ponderosae YQE_06268 N
YQE_10906 Dendroctonus ponderosae YQE_10906 N