CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG402027023
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG402027023
T295200_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400069511
NAC/NAM
19
146
PIGYRFRPTDEELINHYLCLKINGCHNQVDVIREIDICKFEPWDLPDLSVVESNDNEWLYFCPIDRKYQNGQRLNRATERGYWKATGKDRNIATRKGAKIGMKKTLVYYIGRAPEGKRTNWVIHEYRA
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_27204
Cicer arietinum
Ca_27204
I
0.897
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.884
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.890
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.886
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.917
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.921
Gorai.007G017500
Gossypium raimondii
Gorai.007G017500
I
0.883
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.913
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.913
MDP0000907489
Malus domestica
MDP0000907489
N
0.878
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
0.925
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.892
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.973
Pm019659
Prunus mume
Pm019659
I
0.919
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.871
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.970
Solyc06g073050.2
Solanum lycopersicum
Solyc06g073050.2
N
0.990
TCM_015535
Theobroma cacao
TCM_015535
I
0.913
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.873