CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc06g073050.2
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc06g073050.2
T295867_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc06g073050.2.1
NAC/NAM
20
147
PIGYRFRPTDEELINHYLCLKINGCHDQVGVIREIDICKFEPWDLPDLSVVESNDNEWFYFCPIDRKYQNGQRLNRATERGYWKATGKDRNIATRKGAKIGMKKTLVYYNGRAPEGKRTNWVIHEYRA
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG402027023
Solanum tuberosum
PGSC0003DMG402027023
N
0.990
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.980
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.978
TCM_015535
Theobroma cacao
TCM_015535
I
0.956
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
0.954
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.947
Pm019659
Prunus mume
Pm019659
I
0.944
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.943
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.943
Gorai.007G017500
Gossypium raimondii
Gorai.007G017500
I
0.940
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.938
Ca_27204
Cicer arietinum
Ca_27204
I
0.935
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.930
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.924
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.924
MTR_3g093050
Medicago truncatula
MTR_3g093050
I
0.920
Ca_04069
Cicer arietinum
Ca_04069
I
0.919
Bra033296
Brassica rapa
Bra033296
I
0.916
MDP0000907489
Malus domestica
MDP0000907489
N
0.914
Ca_20988
Cicer arietinum
Ca_20988
I
0.910
chr1.LjT41E18.160.nc
Lotus japonicus
chr1.LjT41E18.160.nc
I
0.910
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.909
MTR_8g023930
Medicago truncatula
MTR_8g023930
I
0.905
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.903
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.900
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.894
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.893
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.893
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.891
mgf022344m
Mimulus guttatus
mgf022344m
I
0.890
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.886
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.885
Eucgr.G01548
Eucalyptus grandis
Eucgr.G01548
N
0.883
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.883
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
0.880
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.880
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.880
Eucgr.G01067
Eucalyptus grandis
Eucgr.G01067
N
0.880
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
0.880
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
0.880
POPTR_0014s07210
Populus trichocarpa
POPTR_0014s07210
I
0.874
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.874
SapurV1A.0321s0350
Salix purpurea
SapurV1A.0321s0350
I
0.873
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.871