POPTR_0002s00730 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0002s00730 T295215_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC031
M07182_2.00 		Arabidopsis thaliana
NTWDCKTGTNNHWYACGY
RCGTRWDNNACAMGHWAN		 Dap-seq
OMalley et al.(2016)
CUC3_col_a 		0.935 0.798
NAC031
M07183_2.00 		Arabidopsis thaliana
CKTGTNNHDCACGYHA
TDRCGTGHDNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC3_colamp_a 		0.935 0.798
NAC098
M07239_2.00 		Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC2_colamp_a 		0.928 0.807
NAC098
M07240_2.00 		Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN		 Dap-seq
OMalley et al.(2016)
CUC2_col 		0.928 0.807
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.903 0.754
NAC92
M00979_2.00 		Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN		 PBM
Lindemose et al.(2014)
ANAC092 		0.895 0.772
NAC92
M00730_2.00 		Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH		 PBM
Chang et al.(2013)
pTH7335 		0.895 0.772
NAC92
M07234_2.00 		Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a 		0.895 0.772
NAC92
M07235_2.00 		Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW		 Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a 		0.895 0.772
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.892 0.763
ANAC100
M02377_2.00 		Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH		 PBM
Weirauch et al.(2014)
pTH9234 		0.888 0.763
ANAC080
M02376_2.00 		Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH9230 		0.886 0.763
NAC079
M02373_2.00 		Arabidopsis thaliana
TTGCGTRY
RYACGCAA		 PBM
Weirauch et al.(2014)
pTH7399 		0.886 0.746
NAC079
M07228_2.00 		Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG		 Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a 		0.886 0.746
NAC079
M07229_2.00 		Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN		 Dap-seq
OMalley et al.(2016)
ANAC079_col 		0.886 0.746
e_gw1.288.15.1
M02381_2.00 		Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN		 PBM
Weirauch et al.(2014)
pTH8467 		0.874 0.737
e_gw1.327.11.1
M02382_2.00 		Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN		 PBM
Weirauch et al.(2014)
pTH8478 		0.873 0.728
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s00730.1 NAC/NAM 22 148

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29742.m001447 Ricinus communis 29742.m001447 N
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N
Bo2g046050 Brassica oleracea Bo2g046050 N
Bo2g098940 Brassica oleracea Bo2g098940 N
Bo3g022870 Brassica oleracea Bo3g022870 N
Bo3g039260 Brassica oleracea Bo3g039260 N
Bo4g009260 Brassica oleracea Bo4g009260 N
Bo4g197120 Brassica oleracea Bo4g197120 N
Bo9g110930 Brassica oleracea Bo9g110930 N
Bostr.13158s0169 Boechera stricta Bostr.13158s0169 N
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N
Bra004539 Brassica rapa Bra004539 N
Bra008539 Brassica rapa Bra008539 N
Bra022637 Brassica rapa Bra022637 N
Bra039283 Brassica rapa Bra039283 N
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N
Cagra.0483s0079 Capsella grandiflora Cagra.0483s0079 N
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N
Carubv10003403m.g Capsella rubella Carubv10003403m.g N
Carubv10018233m.g Capsella rubella Carubv10018233m.g N
Carubv10024406m.g Capsella rubella Carubv10024406m.g N
Carubv10027412m.g Capsella rubella Carubv10027412m.g N
cassava10382.m1 Manihot esculenta cassava10382.m1 N
cassava32987.m1 Manihot esculenta cassava32987.m1 N
cassava46504.m1 Manihot esculenta cassava46504.m1 N
Ca_15029 Cicer arietinum Ca_15029 N
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N
Cla011563 Citrullus lanatus Cla011563 N
CPC Arabidopsis thaliana AT2G46410 N
CPC Arabidopsis lyrata Al_scaffold_0005_3105 N
Cucsa.201970 Cucumis sativus Cucsa.201970 N
ETC3 Arabidopsis thaliana AT4G01060 N
ETC3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002892 N
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N
GLYMA01G43435 Glycine max GLYMA01G43435 N
GLYMA11G02061 Glycine max GLYMA11G02061 N
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N
GSMUA_Achr3G25090_001 Musa acuminata GSMUA_Achr3G25090_001 N
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N
Lus10005949.g Linum usitatissimum Lus10005949.g N
MDP0000141474 Malus domestica MDP0000141474 N
MDP0000583070 Malus domestica MDP0000583070 N
MTR_2g088730 Medicago truncatula MTR_2g088730 N
MTR_5g009460 Medicago truncatula MTR_5g009460 N
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N
Pm018400 Prunus mume Pm018400 N
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N
TCM_005177 Theobroma cacao TCM_005177 N
TCM_016428 Theobroma cacao TCM_016428 N
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N
Thhalv10029104m.g Eutrema salsugineum Thhalv10029104m.g N
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N
TRY Arabidopsis thaliana AT5G53200 N
VIT_10s0116g01760 Vitis vinifera VIT_10s0116g01760 N
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N