CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10033389m.g
(
Citrus clementina
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Ciclev10033389m.g
T297648_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10033389m
NAC/NAM
2
110
NKVSGRSNGELCQFIRDIELYEYEPSELLSLAYDSGHYKKYFFTRLSHPRRTINRQTQGGRWKITGKQSYVNDKDGDAVATKTPLTYCKKQDPTSELEKTRWLMKEYML
Links
Other
NAC/NAM
family TFs
Other
Citrus clementina
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30128.m008552
Ricinus communis
30128.m008552
I
0.000
AMTR_s00025p00072580
Amborella trichopoda
AMTR_s00025p00072580
I
0.000
Aquca_043_00021
Aquilegia coerulea
Aquca_043_00021
I
0.000
ASR3
Arabidopsis thaliana
AT2G33550
D
0.000
Bo4g043600
Brassica oleracea
Bo4g043600
I
0.000
Bo4g182020
Brassica oleracea
Bo4g182020
I
0.000
Bostr.23794s0746
Boechera stricta
Bostr.23794s0746
I
0.000
Bra005486
Brassica rapa
Bra005486
I
0.000
Bra021860
Brassica rapa
Bra021860
I
0.000
Carubv10023675m.g
Capsella rubella
Carubv10023675m.g
I
0.000
cassava12909.valid.m1
Manihot esculenta
cassava12909.valid.m1
I
0.000
cassava13649.valid.m1
Manihot esculenta
cassava13649.valid.m1
I
0.000
cassava40545.m1
Manihot esculenta
cassava40545.m1
I
0.000
Ciclev10005329m.g
Citrus clementina
Ciclev10005329m.g
I
0.000
Ciclev10033491m.g
Citrus clementina
Ciclev10033491m.g
I
0.000
Cla001502
Citrullus lanatus
Cla001502
I
0.000
Cucsa.349220
Cucumis sativus
Cucsa.349220
I
0.000
Eucgr.B03553
Eucalyptus grandis
Eucgr.B03553
I
0.000
evm.TU.supercontig_2461.1
Carica papaya
evm.TU.supercontig_2461.1
I
0.000
Gorai.002G021600
Gossypium raimondii
Gorai.002G021600
I
0.000
mgf009760m
Mimulus guttatus
mgf009760m
I
0.000
orange1.1g019057m.g
Citrus sinensis
orange1.1g019057m.g
I
0.000
Pm024597
Prunus mume
Pm024597
I
0.000
POPTR_0001s13060
Populus trichocarpa
POPTR_0001s13060
I
0.000
POPTR_0003s16150
Populus trichocarpa
POPTR_0003s16150
I
0.000
SapurV1A.0499s0110
Salix purpurea
SapurV1A.0499s0110
I
0.000
SapurV1A.2674s0010
Salix purpurea
SapurV1A.2674s0010
I
0.000
scaffold_401930.1
Arabidopsis lyrata
scaffold_401930.1
I
0.000
Solyc04g045430.2
Solanum lycopersicum
Solyc04g045430.2
I
0.000
Thhalv10016974m.g
Eutrema salsugineum
Thhalv10016974m.g
I
0.000
VIT_01s0150g00050
Vitis vinifera
VIT_01s0150g00050
I
0.000