gene27940-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene27940-v1.0-hybrid T298004_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.919 0.570
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.918 0.570
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.895 0.535
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.895 0.535
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna27940.1-v1.0-hybrid NAC/NAM 501 641

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001046 Ricinus communis 29738.m001046 I 0.909
29912.m005354 Ricinus communis 29912.m005354 I 0.920
29917.m002016 Ricinus communis 29917.m002016 I 0.896
29983.m003125 Ricinus communis 29983.m003125 I 0.885
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.898
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I 0.917
AMTR_s00060p00054700 Amborella trichopoda AMTR_s00060p00054700 I 0.917
ANAC010 Arabidopsis lyrata scaffold_103183.1 I 0.895
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.886
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.886
anac075 Arabidopsis thaliana AT4G29230 D 0.919
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.919
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I 0.887
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.907
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I 0.962
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.918
BGIOSGA006133 Oryza indica BGIOSGA006133 N 0.944
BGIOSGA018654 Oryza indica BGIOSGA018654 I 0.900
BGIOSGA021039 Oryza indica BGIOSGA021039 I 0.871
BGIOSGA022664 Oryza indica BGIOSGA022664 I 0.872
Bo1g016630 Brassica oleracea Bo1g016630 I 0.922
Bo5g055990 Brassica oleracea Bo5g055990 I 0.895
Bo7g047040 Brassica oleracea Bo7g047040 I 0.885
Bo7g113660 Brassica oleracea Bo7g113660 I 0.907
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I 0.878
Bostr.7867s0691 Boechera stricta Bostr.7867s0691 I 0.901
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.919
Bra011090 Brassica rapa Bra011090 I 0.922
Bra024152 Brassica rapa Bra024152 I 0.907
Bra030099 Brassica rapa Bra030099 I 0.877
Bra032910 Brassica rapa Bra032910 I 0.895
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.886
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.915
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I 0.944
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I 0.943
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.919
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I 0.895
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.919
Carubv10009638m.g Capsella rubella Carubv10009638m.g I 0.895
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.920
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.911
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.908
cassava3690.m1 Manihot esculenta cassava3690.m1 I 0.949
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.920
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.901
Ca_02457 Cicer arietinum Ca_02457 I 0.880
Ca_06348 Cicer arietinum Ca_06348 I 0.882
Ca_11273 Cicer arietinum Ca_11273 I 0.879
Ca_23230 Cicer arietinum Ca_23230 N 0.955
chr1.CM0001.370.nd Lotus japonicus chr1.CM0001.370.nd N 0.929
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.910
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I 0.913
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.946
Ciclev10015976m.g Citrus clementina Ciclev10015976m.g I 0.915
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.910
Cla004701 Citrullus lanatus Cla004701 I 0.940
Cla011431 Citrullus lanatus Cla011431 I 0.918
Cla020673 Citrullus lanatus Cla020673 I 0.909
Cucsa.011210 Cucumis sativus Cucsa.011210 I 0.944
Cucsa.046530 Cucumis sativus Cucsa.046530 I 0.930
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.909
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.918
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.920
Eucgr.D00591 Eucalyptus grandis Eucgr.D00591 I 0.889
Eucgr.D00592 Eucalyptus grandis Eucgr.D00592 I 0.902
Eucgr.D00594 Eucalyptus grandis Eucgr.D00594 I 0.887
Eucgr.G02349 Eucalyptus grandis Eucgr.G02349 I 0.873
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.906
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.910
evm.TU.supercontig_2586.1 Carica papaya evm.TU.supercontig_2586.1 I 0.873
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.920
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.892
F775_07141 Aegilops tauschii F775_07141 I 0.903
F775_30638 Aegilops tauschii F775_30638 I 0.932
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.905
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.920
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.899
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.920
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.920
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.908
GLYMA05G09110 Glycine max GLYMA05G09110 I 0.961
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.915
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.879
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.892
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.891
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.920
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.883
GLYMA12G33460 Glycine max GLYMA12G33460 I 0.877
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.888
GLYMA13G30800 Glycine max GLYMA13G30800 I 0.914
GLYMA13G36980 Glycine max GLYMA13G36980 I 0.877
GLYMA15G08480 Glycine max GLYMA15G08480 I 0.914
GLYMA16G07501 Glycine max GLYMA16G07501 N 0.952
GLYMA19G00640 Glycine max GLYMA19G00640 N 0.952
GLYMA19G08510 Glycine max GLYMA19G08510 N 0.960
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.911
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.957
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.902
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.885
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.905
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.920
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.907
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I 0.881
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.913
GRMZM2G038073 Zea mays GRMZM2G038073 N 0.925
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.913
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.913
GRMZM2G104078 Zea mays GRMZM2G104078 N 0.925
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.925
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.926
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.913
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.933
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.949
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.913
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.924
GSMUA_Achr6G11230_001 Musa acuminata GSMUA_Achr6G11230_001 I 0.927
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.916
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I 0.932
GSMUA_AchrUn_randomG17050_001 Musa acuminata GSMUA_AchrUn_randomG17050_001 I 0.931
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.920
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.918
LPERR01G22300 Leersia perrieri LPERR01G22300 I 0.879
LPERR02G18380 Leersia perrieri LPERR02G18380 N 0.932
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.919
Lus10003668.g Linum usitatissimum Lus10003668.g N 0.954
Lus10018637.g Linum usitatissimum Lus10018637.g I 0.924
Lus10021708.g Linum usitatissimum Lus10021708.g I 0.903
Lus10039873.g Linum usitatissimum Lus10039873.g I 0.925
MDP0000124509 Malus domestica MDP0000124509 I 0.921
MDP0000276278 Malus domestica MDP0000276278 I 0.889
MDP0000283975 Malus domestica MDP0000283975 N 0.938
MDP0000309351 Malus domestica MDP0000309351 I 0.889
MDP0000663564 Malus domestica MDP0000663564 I 0.967
mgf018486m Mimulus guttatus mgf018486m I 0.935
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.915
MTR_1g093670 Medicago truncatula MTR_1g093670 I 0.899
MTR_1g093680 Medicago truncatula MTR_1g093680 I 0.891
MTR_2g014680 Medicago truncatula MTR_2g014680 I 0.899
MTR_2g090735 Medicago truncatula MTR_2g090735 I 0.872
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.891
MTR_7g033320 Medicago truncatula MTR_7g033320 I 0.938
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.891
NAC010 Arabidopsis thaliana AT1G28470 D 0.895
OB01G15780 Oryza brachyantha OB01G15780 I 0.918
OB02G30060 Oryza brachyantha OB02G30060 N 0.956
OB05G15600 Oryza brachyantha OB05G15600 I 0.950
OB06G19430 Oryza brachyantha OB06G19430 I 0.886
OBART01G05840 Oryza barthii OBART01G05840 I 0.918
OBART02G22660 Oryza barthii OBART02G22660 N 0.944
OBART05G06140 Oryza barthii OBART05G06140 I 0.916
OBART06G10240 Oryza barthii OBART06G10240 I 0.875
OBART06G18520 Oryza barthii OBART06G18520 I 0.871
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.918
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N 0.944
OGLUM05G06420 Oryza glumaepatula OGLUM05G06420 I 0.896
OGLUM06G11140 Oryza glumaepatula OGLUM06G11140 I 0.875
OGLUM06G19630 Oryza glumaepatula OGLUM06G19630 I 0.871
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.918
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.885
OLONG_017685 Oryza longistaminata OLONG_017685 I 0.875
OLONG_021085 Oryza longistaminata OLONG_021085 I 0.923
OLONG_021848 Oryza longistaminata OLONG_021848 N 0.942
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.882
OMERI02G22200 Oryza meridionalis OMERI02G22200 N 0.944
OMERI06G11940 Oryza meridionalis OMERI06G11940 I 0.875
OMERI06G18870 Oryza meridionalis OMERI06G18870 I 0.871
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.918
ONIVA02G25300 Oryza nivara ONIVA02G25300 N 0.944
ONIVA05G06750 Oryza nivara ONIVA05G06750 I 0.900
ONIVA06G11950 Oryza nivara ONIVA06G11950 I 0.875
ONIVA06G22200 Oryza nivara ONIVA06G22200 I 0.871
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.918
OPUNC01G25960 Oryza punctata OPUNC01G25960 I 0.882
OPUNC02G20570 Oryza punctata OPUNC02G20570 N 0.944
OPUNC05G05600 Oryza punctata OPUNC05G05600 I 0.928
OPUNC06G09830 Oryza punctata OPUNC06G09830 I 0.879
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.910
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.918
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.882
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N 0.944
ORGLA05G0055000 Oryza glaberrima ORGLA05G0055000 I 0.900
ORGLA06G0096700 Oryza glaberrima ORGLA06G0096700 I 0.875
ORGLA06G0153500 Oryza glaberrima ORGLA06G0153500 I 0.871
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.918
ORUFI01G29010 Oryza rufipogon ORUFI01G29010 I 0.882
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N 0.944
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I 0.936
ORUFI06G10770 Oryza rufipogon ORUFI06G10770 I 0.875
ORUFI06G19520 Oryza rufipogon ORUFI06G19520 I 0.871
OS01G0191300 Oryza sativa OS01G0191300 I 0.918
OS02G0594800 Oryza sativa OS02G0594800 N 0.944
OS05G0194500 Oryza sativa OS05G0194500 I 0.900
OS06G0560300 Oryza sativa OS06G0560300 I 0.871
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.904
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I 0.942
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I 0.946
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I 0.927
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.895
Pavir.Db01100 Panicum virgatum Pavir.Db01100 I 0.891
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.926
Pavir.Ga02265 Panicum virgatum Pavir.Ga02265 I 0.942
Pavir.Ga02302 Panicum virgatum Pavir.Ga02302 I 0.928
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.884
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.926
Pavir.J36494 Panicum virgatum Pavir.J36494 I 0.904
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.946
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.955
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.904
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.879
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I 0.937
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.920
PGSC0003DMG400031753 Solanum tuberosum PGSC0003DMG400031753 I 0.876
PK17141.1 Cannabis sativa PK17141.1 I 0.918
PK25812.1 Cannabis sativa PK25812.1 I 0.925
PK27085.1 Cannabis sativa PK27085.1 D 0.918
PK28347.1 Cannabis sativa PK28347.1 I 0.915
Pm010104 Prunus mume Pm010104 I 0.889
Pm015625 Prunus mume Pm015625 I 0.959
Pm027280 Prunus mume Pm027280 I 0.918
Pm029010 Prunus mume Pm029010 I 0.881
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.960
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.918
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I 0.885
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.887
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.923
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.898
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.918
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.918
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.949
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.886
SapurV1A.0012s0710 Salix purpurea SapurV1A.0012s0710 I 0.875
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.914
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.918
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.908
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.958
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.917
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.958
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.899
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.899
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.908
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.899
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.926
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.884
Sb04g024780 Sorghum bicolor Sb04g024780 N 0.929
Sb09g006015 Sorghum bicolor Sb09g006015 I 0.886
Sb09g006018 Sorghum bicolor Sb09g006018 I 0.911
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.916
Si001527m.g Setaria italica Si001527m.g I 0.923
Si002301m.g Setaria italica Si002301m.g I 0.884
Si006639m.g Setaria italica Si006639m.g I 0.884
Si017393m.g Setaria italica Si017393m.g I 0.919
Si019444m.g Setaria italica Si019444m.g I 0.904
Si024889m.g Setaria italica Si024889m.g I 0.879
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.907
Solyc02g077610.2 Solanum lycopersicum Solyc02g077610.2 I 0.876
Solyc02g093420.2 Solanum lycopersicum Solyc02g093420.2 I 0.927
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I 0.877
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.920
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.879
TCM_008229 Theobroma cacao TCM_008229 I 0.885
TCM_011869 Theobroma cacao TCM_011869 I 0.904
TCM_016984 Theobroma cacao TCM_016984 I 0.943
TCM_029798 Theobroma cacao TCM_029798 I 0.887
TCM_037747 Theobroma cacao TCM_037747 I 0.920
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I 0.895
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.922
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.886
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I 0.940
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I 0.932
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I 0.932
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I 0.873
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.882
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.881
TRIUR3_21992 Triticum urartu TRIUR3_21992 I 0.873
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.884
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.903
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.920
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.934