Lus10037939.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10037939.g T298360_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.944 0.886
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.944 0.886
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10037939 NAC/NAM 33 159

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.000
BGIOSGA007184 Oryza indica BGIOSGA007184 N 0.000
BRADI3G02980 Brachypodium distachyon BRADI3G02980 N 0.000
F775_12975 Aegilops tauschii F775_12975 N 0.000
GRMZM2G361611 Zea mays GRMZM2G361611 N 0.000
GRMZM2G444748 Zea mays GRMZM2G444748 N 0.000
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.000
MLOC_63436 Hordeum vulgare MLOC_63436 N 0.000
OBART02G02570 Oryza barthii OBART02G02570 N 0.000
OGLUM02G02590 Oryza glumaepatula OGLUM02G02590 N 0.000
ONIVA02G02510 Oryza nivara ONIVA02G02510 N 0.000
OPUNC02G02000 Oryza punctata OPUNC02G02000 N 0.000
ORGLA02G0024700 Oryza glaberrima ORGLA02G0024700 N 0.000
ORUFI02G02580 Oryza rufipogon ORUFI02G02580 N 0.000
OS02G0132500 Oryza sativa OS02G0132500 N 0.000
Traes_6AS_FDF16F4EA Triticum aestivum Traes_6AS_FDF16F4EA N 0.000