Pavir.Aa00706 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Aa00706 T298741_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JUB1
M07191_2.00 		Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR		 Dap-seq
OMalley et al.(2016)
ANAC042_col_a 		0.933 0.711
ANAC094
M07236_2.00 		Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR		 Dap-seq
OMalley et al.(2016)
ANAC094_col_a 		0.919 0.851
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa00706.1.p NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

260 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01600 Aegilops tauschii F775_01600 N 0.000
F775_01601 Aegilops tauschii F775_01601 N 0.000
F775_33205 Aegilops tauschii F775_33205 N 0.000
MLOC_57973 Hordeum vulgare MLOC_57973 N 0.000
MLOC_8015 Hordeum vulgare MLOC_8015 N 0.000
TRIUR3_26695 Triticum urartu TRIUR3_26695 N 0.000
TRIUR3_33588 Triticum urartu TRIUR3_33588 N 0.000