CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J21487
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J21487
T298981_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J21487.1.p
NAC/NAM
17
153
APAFDSHPSDLVLVRSYLRPWVAQGVRPPGAFVHAADLYAAEPGELARRFRAAVARDGERAWYFLSPLRTKSPRGRRKARTVAGGAGWWHGEAGPRPVLDPLDGRRKVGHRQSFSFMRRGPDGAPVRTGWIMVELRL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g005970
Brassica oleracea
Bo9g005970
N
0.000
Bostr.2983s0195
Boechera stricta
Bostr.2983s0195
N
0.000
Bra036251
Brassica rapa
Bra036251
N
0.000
BZO2H1
Arabidopsis thaliana
AT4G02640
N
0.000
Cagra.0635s0017
Capsella grandiflora
Cagra.0635s0017
N
0.000
Carubv10001050m.g
Capsella rubella
Carubv10001050m.g
N
0.000
evm.TU.supercontig_52.101
Carica papaya
evm.TU.supercontig_52.101
I
0.000
Thhalv10028688m.g
Eutrema salsugineum
Thhalv10028688m.g
N
0.000