CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0635s0017
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.0635s0017
T071471_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0635s0017.1.p
bZIP
189
248
PEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQLSNMNHKYDEAA
Cagra.0635s0017.2.p
bZIP
183
242
PEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQLSNMNHKYDEAA
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZO2H1
Arabidopsis thaliana
AT4G02640
N
0.844
BZO2H1
Arabidopsis lyrata
fgenesh2_kg.6__3429__AT4G02640.2
N
0.844
Bostr.2983s0195
Boechera stricta
Bostr.2983s0195
N
0.844
Carubv10001050m.g
Capsella rubella
Carubv10001050m.g
N
0.844
Bo9g005970
Brassica oleracea
Bo9g005970
N
0.825
Bra036251
Brassica rapa
Bra036251
N
0.825
Thhalv10028688m.g
Eutrema salsugineum
Thhalv10028688m.g
N
0.825
evm.TU.supercontig_52.101
Carica papaya
evm.TU.supercontig_52.101
I
0.789