Pavir.J36955 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J36955 T299015_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.908 0.583
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.908 0.583
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.908 0.583
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.905 0.583
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J36955.1.p NAC/NAM 14 145

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015007 Calypte anna Aan_R015007 N
Afo_R012887 Aptenodytes forsteri Afo_R012887 N
Brh_R000757 Buceros rhinoceros Brh_R000757 N
ENSAMEG00000019149 Ailuropoda melanoleuca ENSAMEG00000019149 N
ENSCPOG00000022575 Cavia porcellus ENSCPOG00000022575 N
ENSCSAG00000000386 Chlorocebus sabaeus ENSCSAG00000000386 N
ENSLACG00000001352 Latimeria chalumnae ENSLACG00000001352 N
ENSMEUG00000006670 Macropus eugenii ENSMEUG00000006670 N
ENSMICG00000012196 Microcebus murinus ENSMICG00000012196 N
ENSMPUG00000019997 Mustela putorius furo ENSMPUG00000019997 N
ENSNLEG00000005902 Nomascus leucogenys ENSNLEG00000005902 N
ENSOARG00000015061 Ovis aries ENSOARG00000015061 N
ENSP00000355162 Macaca fascicularis ENSP00000355162 N
ENSP00000355162-D1 Bos grunniens ENSP00000355162-D1 N
ENSPANG00000002290 Papio anubis ENSPANG00000002290 N
ENSPPYG00000015125 Pongo abelii ENSPPYG00000015125 N
ENSPSIG00000000540 Pelodiscus sinensis ENSPSIG00000000540 N
ENSSHAG00000007826 Sarcophilus harrisii ENSSHAG00000007826 N
ENSSTOG00000020903 Ictidomys tridecemlineatus ENSSTOG00000020903 N
ENSTSYG00000006216 Tarsius syrichta ENSTSYG00000006216 N
Gfo_R010567 Geospiza fortis Gfo_R010567 N
Tal_R011337 Tyto alba Tal_R011337 N
TIGD4 Homo sapiens ENSG00000169989 N
TIGD4 Bos taurus ENSBTAG00000009161 N
TIGD4 Canis familiaris ENSCAFG00000008168 N
TIGD4 Choloepus hoffmanni ENSCHOG00000003926 N
TIGD4 Callithrix jacchus ENSCJAG00000021812 N
TIGD4 Dasypus novemcinctus ENSDNOG00000006525 N
TIGD4 Equus caballus ENSECAG00000004395 N
TIGD4 Erinaceus europaeus ENSEEUG00000001554 N
TIGD4 Tursiops truncatus ENSTTRG00000016046 N
TIGD4 Echinops telfairi ENSETEG00000011110 N
TIGD4 Taeniopygia guttata ENSTGUG00000005046 N
TIGD4 Felis catus ENSFCAG00000028877 N
Tigd4 Mus musculus ENSMUSG00000047819 N
Tigd4 Rattus norvegicus ENSRNOG00000010741 N
TIGD4 Pteropus vampyrus ENSPVAG00000013544 N
TIGD4 Pan troglodytes ENSPTRG00000016518 N
TIGD4 Gorilla gorilla ENSGGOG00000011836 N
TIGD4 Loxodonta africana ENSLAFG00000028471 N
TIGD4 Procavia capensis ENSPCAG00000014843 N
TIGD4 Myotis lucifugus ENSMLUG00000028008 N
TIGD4 Ochotona princeps ENSOPRG00000009824 N
TIGD4 Otolemur garnettii ENSOGAG00000005277 N
TIGD4 Macaca mulatta ENSMMUG00000018489 N
TIGD4 Monodelphis domestica ENSMODG00000001071 N