CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VHEMI01254
(
Torrubiella hemipterigena
)
Ndt80/PhoG
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05224 (NDT80_PhoG)
IPR007888
VHEMI01254
T300145_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vib-1
M02387_2.00
Neurospora crassa
NNNDTHRYRN
NYRYDAHNNN
PBM
Weirauch et al.(2014)
pTH9676
0.756
0.756
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEJ81108
Ndt80/PhoG
177
341
ELTCYRRNLFQVSGSFVTPRGPISIVNDANETVPVQSMEVTISAIESVDGNAVRLIVIPWKTPPPNSPEVNNAPDQEPPSLPLIPFQDNNPEAEGDYAVYPIGWRRLQFRIATANNGRRKELQQHFVLHLKVMGTLADNTKVVLTESTTAPIVVRGRSPRNFQAR
Links
Other
Ndt80/PhoG
family TFs
Other
Torrubiella hemipterigena
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATBZIP9
Arabidopsis lyrata
scaffold_602583.1
N
0.000
Bo2g159200
Brassica oleracea
Bo2g159200
N
0.000
Bostr.5763s0039
Boechera stricta
Bostr.5763s0039
N
0.000
Bra020471
Brassica rapa
Bra020471
N
0.000
Cagra.0622s0012
Capsella grandiflora
Cagra.0622s0012
N
0.000
Carubv10001471m.g
Capsella rubella
Carubv10001471m.g
N
0.000
Thhalv10004701m.g
Eutrema salsugineum
Thhalv10004701m.g
I
0.000