CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.4395s0205
(
Capsella grandiflora
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Cagra.4395s0205
T300959_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.4395s0205.1.p
NFX
308
325
CPHVCVLQCHPGPCPPCK
Cagra.4395s0205.1.p
NFX
363
381
CGRHQCERACHVGPCDPCQ
Cagra.4395s0205.1.p
NFX
427
445
CGNHFCSEVCHPGPCGDCD
Cagra.4395s0205.1.p
NFX
486
504
CRLHTCNEVCHEGDCPPCL
Cagra.4395s0205.1.p
NFX
545
556
CGRHRCSERCCP
Cagra.4395s0205.1.p
NFX
584
602
CGQHSCESLCHSGHCPPCL
Cagra.4395s0205.1.p
NFX
694
711
CGMHACARTCHPEPCDNY
Links
Other
NFX
family TFs
Other
Capsella grandiflora
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM01G12950
Oryza glumaepatula
OGLUM01G12950
N