Cagra.4395s0205 (Capsella grandiflora)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Cagra.4395s0205 T300959_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.4395s0205.1.p NFX 308 325
Cagra.4395s0205.1.p NFX 363 381
Cagra.4395s0205.1.p NFX 427 445
Cagra.4395s0205.1.p NFX 486 504
Cagra.4395s0205.1.p NFX 545 556
Cagra.4395s0205.1.p NFX 584 602
Cagra.4395s0205.1.p NFX 694 711

Links

Other NFX family TFs
Other Capsella grandiflora TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400014182 Solanum tuberosum PGSC0003DMG400014182 N 0.837
Bostr.13671s0471 Boechera stricta Bostr.13671s0471 N 0.817
Thhalv10006708m.g Eutrema salsugineum Thhalv10006708m.g N 0.817
MTR_6g071140 Medicago truncatula MTR_6g071140 N 0.780
SapurV1A.0665s0040 Salix purpurea SapurV1A.0665s0040 N 0.780
Bo8g059130 Brassica oleracea Bo8g059130 N 0.752
Bra018458 Brassica rapa Bra018458 N 0.752
Bostr.15697s0430 Boechera stricta Bostr.15697s0430 N 0.746
VIT_17s0000g01920 Vitis vinifera VIT_17s0000g01920 N 0.722
Solyc03g118420.2 Solanum lycopersicum Solyc03g118420.2 N 0.718
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.716
MDP0000280911 Malus domestica MDP0000280911 N 0.713