Thhalv10006708m.g (Eutrema salsugineum)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Thhalv10006708m.g T300990_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10006708m NFX 112 129
Thhalv10006708m NFX 157 185
Thhalv10006708m NFX 231 249
Thhalv10006708m NFX 290 308
Thhalv10006708m NFX 349 360
Thhalv10006708m NFX 388 406
Thhalv10006708m NFX 498 514
Thhalv10006708m NFX 526 557

Links

Other NFX family TFs
Other Eutrema salsugineum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.13671s0471 Boechera stricta Bostr.13671s0471 N 0.937
Bostr.15697s0430 Boechera stricta Bostr.15697s0430 N 0.873
VIT_17s0000g01920 Vitis vinifera VIT_17s0000g01920 N 0.833
Solyc03g118420.2 Solanum lycopersicum Solyc03g118420.2 N 0.824
Bo8g059130 Brassica oleracea Bo8g059130 N 0.817
Bra018458 Brassica rapa Bra018458 N 0.817
Cagra.4395s0205 Capsella grandiflora Cagra.4395s0205 N 0.817
chr2.LjT01H08.70.nc Lotus japonicus chr2.LjT01H08.70.nc N 0.796
MDP0000280911 Malus domestica MDP0000280911 N 0.775
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.761
Pm025049 Prunus mume Pm025049 N 0.761
AMTR_s00060p00124510 Amborella trichopoda AMTR_s00060p00124510 N 0.754
GRMZM2G307823 Zea mays GRMZM2G307823 N 0.754
GRMZM2G409627 Zea mays GRMZM2G409627 N 0.754
MTR_4g027040 Medicago truncatula MTR_4g027040 N 0.754
27791.m000083 Ricinus communis 27791.m000083 N 0.746
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.732
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.732
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.725
PGSC0003DMG400014182 Solanum tuberosum PGSC0003DMG400014182 N 0.718
Bo5g010600 Brassica oleracea Bo5g010600 N 0.713
Bra019958 Brassica rapa Bra019958 N 0.713
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.713
Ca_16794 Cicer arietinum Ca_16794 N 0.704